RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ALCAMQ13740 583 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 RSRC2Q7L4I2 434 aaKnown RBP11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 MIER3Q7Z3K6 550 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 C12orf42Q96LP6 360 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 IRX2Q9BZI1 471 aaPredicted RBP11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 DEF6Q9H4E7 631 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 PARVGQ9HBI0 331 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 LUC7LQ9NQ29 371 aaKnown RBP11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 JADE2Q9NQC1 790 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 TBC1D22BQ9NU19 505 aa11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 ARMCX3Q9UH62 379 aaPredicted RBP11.52□□□□□ -0.57
POLR2J3-201ENST00000379340 A0A0U1RQJ8 604 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 LRRC53A6NM62 1247 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 C19orf81C9J6K1 198 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 NKRFO15226 690 aaKnown RBP eCLIP11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 PPP1R12BO60237 982 aaPredicted RBP11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 LYPLA2O95372 231 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 GCNT3O95395 438 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 P4HBP07237 508 aaKnown RBP11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 SLC10A3P09131 477 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 MYBP10242 640 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 MAPTP10636 758 aaKnown RBP11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 UBXN2AP68543 259 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 KIF5AQ12840 1032 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 FBXO38Q6PIJ6 1188 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 SAMD1Q6SPF0 538 aaPredicted RBP11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 RRAGAQ7L523 313 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 GOLGA5Q8TBA6 731 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 SYTL5Q8TDW5 730 aaPredicted RBP11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 ATRIPQ8WXE1 791 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 PURBQ96QR8 312 aaKnown RBP11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 LXNQ9BS40 222 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 MKNK1Q9BUB5 465 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 TIPINQ9BVW5 301 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 LSM14BQ9BX40 385 aaKnown RBP11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 RPAP3Q9H6T3 665 aaPredicted RBP11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 ZSWIM4Q9H7M6 989 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 PLCB1Q9NQ66 1216 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 DBR1Q9UK59 544 aaKnown RBP11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 MYO6Q9UM54 1294 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 GUCA1BQ9UMX6 200 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 DAAM1Q9Y4D1 1078 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 PHIPQ8WWQ0 1821 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 ASTN1O14525 1302 aa11.51□□□□□ -0.57
POLR2J3-201ENST00000379340 GTPBP10A4D1E9 387 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 ARHGEF35A5YM69 484 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 NFIBO00712 420 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 PRPF6O94906 941 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 AFPP02771 609 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 NR3C1P04150 777 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 XRCC5P13010 732 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 ITGB5P18084 799 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 CASP5P51878 434 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 KIF11P52732 1056 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 BACE1P56817 501 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 CHMP4BP1P59074 171 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 KCNH2Q12809 1159 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 MTMR2Q13614 643 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 MYBPC2Q14324 1141 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 TKFCQ3LXA3 575 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 SLC9C1Q4G0N8 1177 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 SFMBT2Q5VUG0 894 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 MYCT1Q8N699 235 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 ZNF280CQ8ND82 737 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 LRRN4CLQ8ND94 238 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 RDM1Q8NG50 284 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 PIGOQ8TEQ8 1089 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 CCDC102AQ96A19 550 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 RAVER2Q9HCJ3 691 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 AGO4Q9HCK5 861 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 PICK1Q9NRD5 415 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 KCNH7Q9NS40 1196 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 OGFRQ9NZT2 677 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 ARHGAP20Q9P2F6 1191 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 TCEAL9Q9UHQ7 104 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 FBXL5Q9UKA1 691 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 PCDHB13Q9Y5F0 798 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 MYH11P35749 1972 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 RSPH10B2B2RC85 870 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 RBAK-RBAKDNI3L0D1 243 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 EPHB6O15197 1021 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 PJA2O43164 708 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 ATP8B1O43520 1251 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 AKR1B10O60218 316 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 SERPING1P05155 500 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 TUBBP07437 444 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 RSPH10BP0C881 870 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 HOXD13P35453 343 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 EIF4A3P38919 411 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 JAK3P52333 1124 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 AMPD2Q01433 879 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 GLIPR1L2Q4G1C9 344 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 NOL9Q5SY16 702 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 NBPF12Q5TAG4 269 aaPredicted RBP11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 HS2ST1Q7LGA3 356 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 RASAL3Q86YV0 1011 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 CPXCR1Q8N123 301 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 C2orf69Q8N8R5 385 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 TRIM58Q8NG06 486 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 SMCR8Q8TEV9 937 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms