RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 ECEL1O95672 775 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 CYP4F22Q6NT55 531 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 SUDS3Q9H7L9 328 aaPredicted RBP11.76□□□□□ -0.53
LINC00654-201ENST00000379053 KIAA1586Q9HCI6 787 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 TTC4O95801 387 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 CDR2Q01850 454 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 SNAPC2Q13487 334 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 TMCO4Q5TGY1 634 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 CEP95Q96GE4 821 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 SH3GLB2Q9NR46 395 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 GOLGA8QA0A0J9YX86 632 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 GOLGA8OA6NCC3 632 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 GOLGA8NF8WBI6 632 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 CLNS1AP54105 237 aaKnown RBP11.75□□□□□ -0.53
LINC00654-201ENST00000379053 TMEM63CQ9P1W3 806 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 HERC5Q9UII4 1024 aaKnown RBP11.75□□□□□ -0.53
LINC00654-201ENST00000379053 SART1O43290 800 aaKnown RBP11.75□□□□□ -0.53
LINC00654-201ENST00000379053 C6orf222P0C671 652 aaPredicted RBP11.75□□□□□ -0.53
LINC00654-201ENST00000379053 CCNE1P24864 410 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 MSH2P43246 934 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 GUCY2DQ02846 1103 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 PCDHB6Q9Y5E3 794 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 TXNP10599 105 aaKnown RBP11.75□□□□□ -0.53
LINC00654-201ENST00000379053 MTMR2Q13614 643 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 TMTC3Q6ZXV5 915 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 SLC7A5P2Q9GIP4 190 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 DYRK4Q9NR20 520 aa11.75□□□□□ -0.53
LINC00654-201ENST00000379053 SLC16A4O15374 487 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00654-201ENST00000379053 TOGARAM2Q6ZUX3 1019 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 STAG1Q8WVM7 1258 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 DACT3Q96B18 629 aaPredicted RBP11.74□□□□□ -0.53
LINC00654-201ENST00000379053 SPATA17Q96L03 361 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 AXIN2Q9Y2T1 843 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 PBRM1Q86U86 1689 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 CYP2B6P20813 491 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 GBP7Q8N8V2 638 aaPredicted RBP11.74□□□□□ -0.53
LINC00654-201ENST00000379053 DHX38Q92620 1227 aaKnown RBP11.74□□□□□ -0.53
LINC00654-201ENST00000379053 IFT43Q96FT9 208 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 VPS39Q96JC1 886 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 FAM213AQ9BRX8 229 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 MAP3K20Q9NYL2 800 aaKnown RBP11.74□□□□□ -0.53
LINC00654-201ENST00000379053 STK38LQ9Y2H1 464 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 SCINQ9Y6U3 715 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 PPP4R3CPQ6ZMV5 832 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00654-201ENST00000379053 ITM2BQ9Y287 266 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 DAAM1Q9Y4D1 1078 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 TNS3Q68CZ2 1445 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 COG7P83436 770 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 CYP27A1Q02318 531 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 EXT2Q93063 718 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 DYDC2Q96IM9 177 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 RAB23Q9ULC3 237 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 KIF3CO14782 793 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 UPP2O95045 317 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 RFC1P35251 1148 aaPredicted RBP11.74□□□□□ -0.53
LINC00654-201ENST00000379053 ARHGAP25P42331 645 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 MYRIPQ8NFW9 859 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 CFAP36Q96G28 342 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 SYNDIG1Q9H7V2 258 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 DCP1AQ9NPI6 582 aaPredicted RBP11.74□□□□□ -0.53
LINC00654-201ENST00000379053 JRKLQ9Y4A0 524 aa11.74□□□□□ -0.53
LINC00654-201ENST00000379053 EVI5O60447 810 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 QARSP47897 775 aaKnown RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 IRX4P78413 519 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 RAD51Q06609 339 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 FAM117BQ6P1L5 589 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 ASIC4Q96FT7 647 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 HACD3Q9P035 362 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 ABCA8O94911 1581 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 MOCS2O96007 188 aaPredicted RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 C9orf131Q5VYM1 1079 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 ARL6IP4Q66PJ3 421 aaKnown RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 RBM46Q8TBY0 533 aaKnown RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 ACAP3Q96P50 834 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 POLR3FQ9H1D9 316 aaPredicted RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 POTEMA6NI47 508 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 DYNC1LI2O43237 492 aaPredicted RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 P4HBP07237 508 aaKnown RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 PGBD3Q8N328 593 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 RNF10Q8N5U6 811 aaKnown RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 XXYLT1Q8NBI6 393 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 TMEM35BQ8NCS4 154 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 PDZD8Q8NEN9 1154 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 SPON2Q9BUD6 331 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 FSD1LQ9BXM9 530 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 KLHL8Q9P2G9 620 aaPredicted RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 SRPRBQ9Y5M8 271 aaKnown RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 CPDO75976 1380 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 GNGT2O14610 69 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 MGEA5O60502 916 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 CTSHP09668 335 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 DCAF4L1Q3SXM0 396 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 ANGEL2Q5VTE6 544 aaKnown RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 KLC3Q6P597 504 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 TTC23LQ6PF05 361 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 POTEDQ86YR6 584 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 CFAP61Q8NHU2 1237 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 AIFM3Q96NN9 605 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms