RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 KCND1Q9NSA2 647 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 SOCS7O14512 581 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 EIF3DO15371 548 aaKnown RBP eCLIP19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 NRDCO43847 1150 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 USO1O60763 962 aaKnown RBP19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 PSAPP07602 524 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 TPM2P07951 284 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 NPEPPSP55786 919 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 TBC1D8BQ0IIM8 1120 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 ODR4Q5SWX8 454 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 SWSAP1Q6NVH7 229 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 MAEAQ7L5Y9 396 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 ZNF720Q7Z2F6 126 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 CCDC60Q8IWA6 550 aaPredicted RBP19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 PANX2Q96RD6 677 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 MMP19Q99542 508 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 BAG1Q99933 345 aaPredicted RBP19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 MROH8Q9H579 483 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 ANKEF1Q9NU02 776 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 SLC45A1Q9Y2W3 748 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 ZMYM2Q9UBW7 1377 aa19.16■□□□□ 0.66
THUMPD2-201ENST00000378727 ARID2Q68CP9 1835 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 PDXKO00764 312 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 KCTD2Q14681 263 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 MAN2A1Q16706 1144 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 VWA3BQ502W6 1294 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 CST9Q5W186 159 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 CYFIP1Q7L576 1253 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 FAM178BQ8IXR5 827 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 CCAR2Q8N163 923 aaKnown RBP19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 SHCBP1Q8NEM2 672 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 RASSF10A6NK89 507 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 UBA1P22314 1058 aaKnown RBP19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 MARSP56192 900 aaKnown RBP19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 ADAM9Q13443 819 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 TRIM14Q14142 442 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 XKR9Q5GH70 373 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 SPRYD7Q5W111 196 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 SMCR8Q8TEV9 937 aaPredicted RBP19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 ZNF526Q8TF50 670 aaPredicted RBP19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 STRA6Q9BX79 667 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 IKZF4Q9H2S9 585 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 NDST4Q9H3R1 872 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 EFCC1Q9HA90 598 aa19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 TYW1Q9NV66 732 aaKnown RBP19.15■□□□□ 0.66
THUMPD2-201ENST00000378727 MCM3APO60318 1980 aa19.14■□□□□ 0.66
THUMPD2-201ENST00000378727 MYH9P35579 1960 aaKnown RBP19.14■□□□□ 0.66
THUMPD2-201ENST00000378727 TGFB1I1O43294 461 aa19.14■□□□□ 0.65
THUMPD2-201ENST00000378727 STX10O60499 249 aa19.14■□□□□ 0.65
THUMPD2-201ENST00000378727 NR2F2P24468 414 aa19.14■□□□□ 0.65
THUMPD2-201ENST00000378727 KLK7P49862 253 aa19.14■□□□□ 0.65
THUMPD2-201ENST00000378727 SYCP1Q15431 976 aa19.14■□□□□ 0.65
THUMPD2-201ENST00000378727 WDR78Q5VTH9 848 aa19.14■□□□□ 0.65
THUMPD2-201ENST00000378727 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.14■□□□□ 0.65
THUMPD2-201ENST00000378727 ANKRD23Q86SG2 305 aa19.14■□□□□ 0.65
THUMPD2-201ENST00000378727 KSR1Q8IVT5 923 aa19.14■□□□□ 0.65
THUMPD2-201ENST00000378727 GTF3C2Q8WUA4 911 aaPredicted RBP19.14■□□□□ 0.65
THUMPD2-201ENST00000378727 ATP6V0A1Q93050 837 aa19.14■□□□□ 0.65
THUMPD2-201ENST00000378727 ERGIC2Q96RQ1 377 aa19.14■□□□□ 0.65
THUMPD2-201ENST00000378727 PPP1R37O75864 691 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 ATG7O95352 703 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 SUPT20HL2P0C7V6 817 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 EEPD1Q7L9B9 569 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 CNGA4Q8IV77 575 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 GPRC5AQ8NFJ5 357 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 CCDC43Q96MW1 224 aaKnown RBP19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 TRMT1Q9NXH9 659 aaKnown RBP19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 SYNGAP1Q96PV0 1343 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 ARHGAP6O43182 974 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 GNA14O95837 355 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 ITGBL1O95965 494 aaPredicted RBP19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 CCDC40Q4G0X9 1142 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 MIS18BP1Q6P0N0 1132 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 ANKRD13CQ8N6S4 541 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 TTYH3Q9C0H2 523 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 UBE4BO95155 1302 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 IGSF9BQ9UPX0 1349 aa19.13■□□□□ 0.65
THUMPD2-201ENST00000378727 TTC26A0AVF1 554 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 CETN3O15182 167 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 CALUO43852 315 aaPredicted RBP19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 ZBTB48P10074 688 aaPredicted RBP19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 TRIM59Q8IWR1 403 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 CCDC51Q96ER9 411 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 PTPN18Q99952 460 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 GPRC5CQ9NQ84 441 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 FARP2O94887 1054 aaPredicted RBP19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 NR3C1P04150 777 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 TPM1P09493 284 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 PLS3P13797 630 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 FECHP22830 423 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 PRKCEQ02156 737 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 FKBP15Q5T1M5 1219 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 TIPINQ9BVW5 301 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 ABHD10Q9NUJ1 306 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 LARSQ9P2J5 1176 aaKnown RBP19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 SIK3Q9Y2K2 1263 aa19.12■□□□□ 0.65
THUMPD2-201ENST00000378727 PLXNB2O15031 1838 aa19.11■□□□□ 0.65
THUMPD2-201ENST00000378727 DKC1O60832 514 aaKnown RBP eCLIP19.11■□□□□ 0.65
THUMPD2-201ENST00000378727 ATP4AP20648 1035 aa19.11■□□□□ 0.65
THUMPD2-201ENST00000378727 OTUD6AQ7L8S5 288 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms