RNA–Protein interactions for RNA: ENST00000378702.8

DMD-209, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 2,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-209ENST00000378702 UTP11Q9Y3A2 253 aaKnown RBP11.15□□□□□ -0.62
DMD-209ENST00000378702 LRP6O75581 1613 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 TLDC2A0PJX2 215 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 B4E1Z4 1266 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 WNT7AO00755 349 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 TTI1O43156 1089 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 ENTPD5O75356 428 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 EYA4O95677 639 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 ZBTB48P10074 688 aaPredicted RBP11.14□□□□□ -0.63
DMD-209ENST00000378702 USP11P51784 963 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 PMS2P54278 862 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 PLOD1Q02809 727 aaPredicted RBP11.14□□□□□ -0.63
DMD-209ENST00000378702 MKRN3Q13064 507 aaKnown RBP11.14□□□□□ -0.63
DMD-209ENST00000378702 EARS2Q5JPH6 523 aaKnown RBP11.14□□□□□ -0.63
DMD-209ENST00000378702 PDXDC1Q6P996 788 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 SEPT14Q6ZU15 432 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 PROCA1Q8NCQ7 364 aaPredicted RBP11.14□□□□□ -0.63
DMD-209ENST00000378702 RNF25Q96BH1 459 aaPredicted RBP11.14□□□□□ -0.63
DMD-209ENST00000378702 CENPKQ9BS16 269 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 TBC1D10AQ9BXI6 508 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 FAM207AQ9NSI2 230 aaPredicted RBP11.14□□□□□ -0.63
DMD-209ENST00000378702 ETNK2Q9NVF9 386 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 NOC2LQ9Y3T9 749 aaKnown RBP11.14□□□□□ -0.63
DMD-209ENST00000378702 PLEKHG3A1L390 1219 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 GPAA1O43292 621 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 KLRC4O43908 158 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 CEP104O60308 925 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 RHOBTB3O94955 611 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 CCNFP41002 786 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 TIMM10P62072 90 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 CGB2Q6NT52 195 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 ANKS1AQ92625 1134 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 NAP1L3Q99457 506 aaPredicted RBP11.14□□□□□ -0.63
DMD-209ENST00000378702 CORO1BQ9BR76 489 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 PUS7LQ9H0K6 701 aaKnown RBP11.14□□□□□ -0.63
DMD-209ENST00000378702 DDX21Q9NR30 783 aaKnown RBP eCLIP11.14□□□□□ -0.63
DMD-209ENST00000378702 CNOT7Q9UIV1 285 aaKnown RBP11.14□□□□□ -0.63
DMD-209ENST00000378702 SH3GLB1Q9Y371 365 aa11.14□□□□□ -0.63
DMD-209ENST00000378702 A0A0J9YVX5 310 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 BICDL2A1A5D9 508 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 KRIT1O00522 736 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 LYNP07948 512 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 IDO1P14902 403 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 CCNE1P24864 410 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 POU5F1Q01860 360 aaKnown RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 GIT2Q14161 759 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 NCCRP1Q6ZVX7 275 aaPredicted RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 CRACR2BQ8N4Y2 399 aaPredicted RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 NRG4Q8WWG1 115 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 CKAP2Q8WWK9 683 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 OLFM3Q96PB7 478 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 BRD8Q9H0E9 1235 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 DHX36Q9H2U1 1008 aaKnown RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 UNC45AQ9H3U1 944 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 ZDHHC18Q9NUE0 388 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 TMEM98Q9Y2Y6 226 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 LMO7Q8WWI1 1683 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 TECPR2O15040 1411 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 TRAFD1O14545 582 aaPredicted RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 ZFXP17010 805 aaPredicted RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 HPCAP84074 193 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 AIMP1Q12904 312 aaKnown RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 PTGDRQ13258 359 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 MAP7Q14244 749 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 RTN1Q16799 776 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 P3H1Q32P28 736 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 KBTBD12Q3ZCT8 623 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 TBC1D9BQ66K14 1250 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 INTS8Q75QN2 995 aaKnown RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 CCDC80Q76M96 950 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 ATG9AQ7Z3C6 839 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 ZNF554Q86TJ5 538 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 CCDC84Q86UT8 332 aaPredicted RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 PROSER2Q86WR7 435 aaPredicted RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 IRGQQ8WZA9 623 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 KCNN1Q92952 543 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 P2RX5Q93086 422 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 PPP2R3CQ969Q6 453 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 SLC7A6OSQ96CW6 309 aaPredicted RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 OXCT2Q9BYC2 517 aaPredicted RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 EDEM3Q9BZQ6 932 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 MYLK2Q9H1R3 596 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 DDX43Q9NXZ2 648 aaKnown RBP11.13□□□□□ -0.63
DMD-209ENST00000378702 IL1RAPL1Q9NZN1 696 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 CHMP2BQ9UQN3 213 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 LMTK3Q96Q04 1460 aa11.13□□□□□ -0.63
DMD-209ENST00000378702 NRXN3Q9Y4C0 1643 aa11.12□□□□□ -0.63
DMD-209ENST00000378702 SMIM23A6NLE4 172 aa11.12□□□□□ -0.63
DMD-209ENST00000378702 NKRFO15226 690 aaKnown RBP eCLIP11.12□□□□□ -0.63
DMD-209ENST00000378702 PAX3P23760 479 aa11.12□□□□□ -0.63
DMD-209ENST00000378702 EPHB2P29323 1055 aa11.12□□□□□ -0.63
DMD-209ENST00000378702 CDK7P50613 346 aa11.12□□□□□ -0.63
DMD-209ENST00000378702 RTP1P59025 263 aa11.12□□□□□ -0.63
DMD-209ENST00000378702 LRRC14Q15048 493 aa11.12□□□□□ -0.63
DMD-209ENST00000378702 CCDC6Q16204 474 aa11.12□□□□□ -0.63
DMD-209ENST00000378702 CCDC92Q53HC0 331 aaPredicted RBP11.12□□□□□ -0.63
DMD-209ENST00000378702 TDRD12Q587J7 1177 aaKnown RBP11.12□□□□□ -0.63
DMD-209ENST00000378702 MFSD4BQ5TF39 518 aa11.12□□□□□ -0.63
DMD-209ENST00000378702 MFSD5Q6N075 450 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms