RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 KLHL8Q9P2G9 620 aaPredicted RBP11.37□□□□□ -0.59
RTN3-206ENST00000377819 INTUQ9ULD6 942 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 RIMBP3CA6NJZ7 1639 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 RIMBP3BA6NNM3 1639 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 PIK3C2BO00750 1634 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 RIMBP3Q9UFD9 1639 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 BIRC5O15392 142 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 GYG2O15488 501 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 SUPT3HO75486 399 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 MYL1P05976 194 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 PMS2P54278 862 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 ETF1P62495 437 aaKnown RBP11.37□□□□□ -0.59
RTN3-206ENST00000377819 SUPT20HL1Q3ZLR7 823 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 PGBD3Q8N328 593 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 CCNYL1Q8N7R7 359 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 NFATC2IPQ8NCF5 419 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 LPIN2Q92539 896 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 CNBD2Q96M20 576 aa11.37□□□□□ -0.59
RTN3-206ENST00000377819 WDR91A4D1P6 747 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 COPEO14579 308 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 PRPF4O43172 522 aaKnown RBP eCLIP11.36□□□□□ -0.593e-8■□□□□ 10.6
RTN3-206ENST00000377819 IL10P22301 178 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 ITGA6P23229 1130 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 RPS6KB1P23443 525 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 DYNC1I2Q13409 638 aaKnown RBP11.36□□□□□ -0.59
RTN3-206ENST00000377819 TP53BP2Q13625 1128 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 TSC22D1Q15714 1073 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 DCAF4L1Q3SXM0 396 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 ZNF713Q8N859 430 aaPredicted RBP11.36□□□□□ -0.59
RTN3-206ENST00000377819 TTC17Q96AE7 1141 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 FAM89AQ96GI7 184 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 BRIP1Q9BX63 1249 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 FTOQ9C0B1 505 aaKnown RBP eCLIP11.36□□□□□ -0.59
RTN3-206ENST00000377819 ZNF556Q9HAH1 456 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 NDE1Q9NXR1 346 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 SEPT9Q9UHD8 586 aaPredicted RBP11.36□□□□□ -0.59
RTN3-206ENST00000377819 PLCH2O75038 1416 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 DCTN3O75935 186 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 OR52Z1P0C646 297 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 HOXA7P31268 230 aaPredicted RBP11.36□□□□□ -0.59
RTN3-206ENST00000377819 DDIT3P35638 169 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 GALNT17Q6IS24 598 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 MB21D1Q8N884 522 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 THAP11Q96EK4 314 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 EPN3Q9H201 632 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 EXOSC4Q9NPD3 245 aaKnown RBP11.36□□□□□ -0.59
RTN3-206ENST00000377819 RNF14Q9UBS8 474 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 ZMYM4Q5VZL5 1548 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 GOLGA8IPA6NC78 632 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 C16orf96A6NNT2 1141 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 PGRMC1O00264 195 aaKnown RBP11.36□□□□□ -0.59
RTN3-206ENST00000377819 ADKP55263 362 aaKnown RBP11.36□□□□□ -0.59
RTN3-206ENST00000377819 PSMD2Q13200 908 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 CC2D2BQ6DHV5 1058 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 FBXO18Q8NFZ0 1043 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 DIS3LQ8TF46 1054 aaKnown RBP11.36□□□□□ -0.59
RTN3-206ENST00000377819 CEP95Q96GE4 821 aa11.36□□□□□ -0.59
RTN3-206ENST00000377819 UTP6Q9NYH9 597 aaKnown RBP11.36□□□□□ -0.59
RTN3-206ENST00000377819 FAM83GA6ND36 823 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 DDAH1O94760 285 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 PRAMEP78395 509 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 ICA1Q05084 483 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 TBC1D9BQ66K14 1250 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 ZNF518AQ6AHZ1 1483 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 ZC3H18Q86VM9 953 aaKnown RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 BLIDQ8IZY5 108 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 CBX8Q9HC52 389 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 GINM1Q9NU53 330 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 ARPP21Q9UBL0 812 aaPredicted RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 BLOC1S6Q9UL45 172 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 LMTK2Q8IWU2 1503 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 ASMTLO95671 621 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 TECP42680 631 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 GTF2IP78347 998 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 CERKLQ49MI3 558 aaPredicted RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 MFSD14BQ5SR56 506 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 BEND6Q5SZJ8 279 aaPredicted RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 C20orf194Q5TEA3 1177 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 ARHGAP18Q8N392 663 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 NEK9Q8TD19 979 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 LRRC59Q96AG4 307 aaKnown RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 SIKE1Q9BRV8 207 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 ECT2Q9H8V3 914 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 MAN1C1Q9NR34 630 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 NDFIP2Q9NV92 336 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 GALNT8Q9NY28 637 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 NOP53Q9NZM5 478 aaKnown RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 TBK1Q9UHD2 729 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 ZNF711Q9Y462 761 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 PJA2O43164 708 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 MYCP01106 439 aaPredicted RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 SMARCA1P28370 1054 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 PSMC2P35998 433 aaKnown RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 EPHB4P54760 987 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 NCKAP1LP55160 1127 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 COPS2P61201 443 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 CYP4A11Q02928 519 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 POU5F1BQ06416 359 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 MORC3Q14149 939 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 POLA2Q14181 598 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms