RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 ZNF70Q9UC06 446 aaPredicted RBP10.54□□□□□ -0.72
TRIM39-202ENST00000376659 PFASO15067 1338 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 NR3C1P04150 777 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 EPB41P11171 864 aaKnown RBP10.54□□□□□ -0.72
TRIM39-202ENST00000376659 TCEAL1Q15170 157 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 HERC4Q5GLZ8 1057 aaPredicted RBP10.54□□□□□ -0.72
TRIM39-202ENST00000376659 EMC10Q5UCC4 262 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 SLC9A9Q8IVB4 645 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 BANK1Q8NDB2 785 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 MS4A14Q96JA4 679 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 TEPSINQ96N21 525 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 MED4Q9NPJ6 270 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 A0A0A6YYK5 440 aaPredicted RBP10.54□□□□□ -0.72
TRIM39-202ENST00000376659 PALMO75781 387 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 TCP1P17987 556 aaKnown RBP10.54□□□□□ -0.72
TRIM39-202ENST00000376659 STAT2P52630 851 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 POU5F1Q01860 360 aaKnown RBP10.54□□□□□ -0.72
TRIM39-202ENST00000376659 GPIHBP1Q8IV16 184 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 MREGQ8N565 214 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 FAM133AQ8N9E0 248 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 IGSF9BQ9UPX0 1349 aa10.54□□□□□ -0.72
TRIM39-202ENST00000376659 CLGNO14967 610 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 POLR3GO15318 223 aaPredicted RBP10.53□□□□□ -0.72
TRIM39-202ENST00000376659 BCRP11274 1271 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 ITGB5P18084 799 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 IQCEQ6IPM2 695 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 ZNF771Q7L3S4 317 aaPredicted RBP10.53□□□□□ -0.72
TRIM39-202ENST00000376659 CNKSR2Q8WXI2 1034 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 CSRNP1Q96S65 589 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 NLRC4Q9NPP4 1024 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 NAGPAQ9UK23 515 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRIM39-202ENST00000376659 DDX3XO00571 662 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRIM39-202ENST00000376659 ZMYND10O75800 440 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 AFPP02771 609 aaKnown RBP10.53□□□□□ -0.72
TRIM39-202ENST00000376659 GLI1P08151 1106 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 GUCY2CP25092 1073 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 HMGB2P26583 209 aaKnown RBP10.53□□□□□ -0.72
TRIM39-202ENST00000376659 CBWD6Q4V339 395 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 CBWD3Q5JTY5 395 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 CBWD5Q5RIA9 395 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 DCAF12L1Q5VU92 463 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 CC2D2BQ6DHV5 1058 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 ZNF720Q7Z2F6 126 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 SCFD2Q8WU76 684 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 BHMT2Q9H2M3 363 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 SBF1O95248 1867 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 TACC1O75410 805 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 ARP10275 920 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 CAP2P40123 477 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 MAGEA1P43355 309 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 HNRNPH2P55795 449 aaKnown RBP10.53□□□□□ -0.72
TRIM39-202ENST00000376659 NNTQ13423 1086 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 IL31RAQ8NI17 732 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 DYDC2Q96IM9 177 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 KCND2Q9NZV8 630 aa10.53□□□□□ -0.72
TRIM39-202ENST00000376659 F8VZ95 297 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 ERLIN1O75477 346 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 IRX5P78411 483 aaPredicted RBP10.52□□□□□ -0.73
TRIM39-202ENST00000376659 PPATQ06203 517 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 ITGB3BPQ13352 177 aaPredicted RBP10.52□□□□□ -0.73
TRIM39-202ENST00000376659 SLC9C1Q4G0N8 1177 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 TTMPQ5BVD1 217 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 GJB7Q6PEY0 223 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 PLEKHO2Q8TD55 490 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 MKNK1Q9BUB5 465 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 PDGFDQ9GZP0 370 aaPredicted RBP10.52□□□□□ -0.73
TRIM39-202ENST00000376659 GBP3Q9H0R5 595 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 VCPKMTQ9H867 229 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 DNM3Q9UQ16 869 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 H0YIN7 160 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 PES1O00541 588 aaKnown RBP10.52□□□□□ -0.73
TRIM39-202ENST00000376659 APBA3O96018 575 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 GAP43P17677 238 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 CXCR5P32302 372 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 PRELPP51888 382 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 SPA17Q15506 151 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 ZC2HC1CQ53FD0 456 aaPredicted RBP10.52□□□□□ -0.73
TRIM39-202ENST00000376659 RBM26Q5T8P6 1007 aaKnown RBP10.52□□□□□ -0.73
TRIM39-202ENST00000376659 HES6Q96HZ4 224 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 CRACR2AQ9BSW2 395 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 STIM2Q9P246 746 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 RABGAP1Q9Y3P9 1069 aa10.52□□□□□ -0.73
TRIM39-202ENST00000376659 BUB1O43683 1085 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 NMT1P30419 496 aaKnown RBP10.51□□□□□ -0.73
TRIM39-202ENST00000376659 GGCXP38435 758 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 GLE1Q53GS7 698 aaKnown RBP10.51□□□□□ -0.73
TRIM39-202ENST00000376659 C10orf76Q5T2E6 689 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 NIPA1Q7RTP0 329 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 DNAAF5Q86Y56 855 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 C12orf56Q8IXR9 622 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 SPICE1Q8N0Z3 855 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 RIN2Q8WYP3 895 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-202ENST00000376659 NOX5Q96PH1 765 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 ODF2LQ9ULJ1 636 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 ZSCAN5CA6NGD5 496 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-202ENST00000376659 H0YGN5 161 aa10.51□□□□□ -0.73
TRIM39-202ENST00000376659 DDX3YO15523 660 aaKnown RBP10.51□□□□□ -0.73
TRIM39-202ENST00000376659 RNF40O75150 1001 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms