RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 SPOUT1Q5T280 376 aaKnown RBP14.98□□□□□ -0.01
CLCN6-205ENST00000376492 FAM102BQ5T8I3 360 aa14.98□□□□□ -0.01
CLCN6-205ENST00000376492 MTHFD1LQ6UB35 978 aa14.98□□□□□ -0.01
CLCN6-205ENST00000376492 TMEM40Q8WWA1 233 aa14.98□□□□□ -0.01
CLCN6-205ENST00000376492 NEK1Q96PY6 1258 aa14.98□□□□□ -0.01
CLCN6-205ENST00000376492 APOL5Q9BWW9 433 aa14.98□□□□□ -0.01
CLCN6-205ENST00000376492 CDHR5Q9HBB8 845 aa14.98□□□□□ -0.01
CLCN6-205ENST00000376492 ERVK-5Q9HDB9 667 aa14.98□□□□□ -0.01
CLCN6-205ENST00000376492 TLR9Q9NR96 1032 aa14.98□□□□□ -0.01
CLCN6-205ENST00000376492 KCNH7Q9NS40 1196 aa14.98□□□□□ -0.01
CLCN6-205ENST00000376492 PCDHB7Q9Y5E2 793 aa14.98□□□□□ -0.01
CLCN6-205ENST00000376492 KMT2EQ8IZD2 1858 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 PLXNA4Q9HCM2 1894 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 KDM3AQ9Y4C1 1321 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 CACNA1HO95180 2353 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 MYO15AQ9UKN7 3530 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 SMIM35A0A1B0GVV1 85 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 SH2B2O14492 632 aaPredicted RBP14.97□□□□□ -0.01
CLCN6-205ENST00000376492 ST18O60284 1047 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 SMARCA1P28370 1054 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 EXOSC10Q01780 885 aaKnown RBP14.97□□□□□ -0.01
CLCN6-205ENST00000376492 APOBRQ0VD83 1088 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 ITGB3BPQ13352 177 aaPredicted RBP14.97□□□□□ -0.01
CLCN6-205ENST00000376492 PKN1Q16512 942 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 HEATR3Q7Z4Q2 680 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 CCDC82Q8N4S0 544 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 PGBD1Q96JS3 809 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 PPP1R16BQ96T49 567 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 PRRX2Q99811 253 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 LZTS2Q9BRK4 669 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 CDH22Q9UJ99 828 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 NOC2LQ9Y3T9 749 aaKnown RBP14.97□□□□□ -0.01
CLCN6-205ENST00000376492 PCDHB12Q9Y5F1 795 aa14.97□□□□□ -0.01
CLCN6-205ENST00000376492 ZFHX2Q9C0A1 2572 aaPredicted RBP14.96□□□□□ -0.01
CLCN6-205ENST00000376492 FSCN2O14926 492 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 MAFGO15525 162 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 PDGFBP01127 241 aaPredicted RBP14.96□□□□□ -0.01
CLCN6-205ENST00000376492 ARP10275 920 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 FGFR1P11362 822 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 ATF7P17544 494 aaPredicted RBP14.96□□□□□ -0.01
CLCN6-205ENST00000376492 GNAQP50148 359 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 STAT5BP51692 787 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 UBE3AQ05086 875 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 PTPN21Q16825 1174 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 ADCK5Q3MIX3 580 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 PLPP4Q5VZY2 271 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 NFXL1Q6ZNB6 911 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 DHX32Q7L7V1 743 aaKnown RBP14.96□□□□□ -0.01
CLCN6-205ENST00000376492 PLPPR4Q7Z2D5 763 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 THNSL1Q8IYQ7 743 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 COLGALT1Q8NBJ5 622 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 KAT6AQ92794 2004 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 ADAM2Q99965 735 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 MXRA8Q9BRK3 442 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 SDF4Q9BRK5 362 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 S1PR5Q9H228 398 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 TYW1Q9NV66 732 aaKnown RBP14.96□□□□□ -0.01
CLCN6-205ENST00000376492 TMEM260Q9NX78 707 aa14.96□□□□□ -0.01
CLCN6-205ENST00000376492 DENND3A2RUS2 1198 aa14.95□□□□□ -0.02
CLCN6-205ENST00000376492 GFRA3O60609 400 aa14.95□□□□□ -0.02
CLCN6-205ENST00000376492 RPS6KA5O75582 802 aa14.95□□□□□ -0.02
CLCN6-205ENST00000376492 CCNE2O96020 404 aa14.95□□□□□ -0.02
CLCN6-205ENST00000376492 HMGB1P09429 215 aaKnown RBP14.95□□□□□ -0.02
CLCN6-205ENST00000376492 AVPR2P30518 371 aa14.95□□□□□ -0.02
CLCN6-205ENST00000376492 TECP42680 631 aa14.95□□□□□ -0.02
CLCN6-205ENST00000376492 LLGL2Q6P1M3 1020 aa14.95□□□□□ -0.02
CLCN6-205ENST00000376492 KIAA0319LQ8IZA0 1049 aa14.95□□□□□ -0.02
CLCN6-205ENST00000376492 NME8Q8N427 588 aa14.95□□□□□ -0.02
CLCN6-205ENST00000376492 CDCA3Q99618 268 aaPredicted RBP14.95□□□□□ -0.02
CLCN6-205ENST00000376492 AAASQ9NRG9 546 aa14.95□□□□□ -0.02
CLCN6-205ENST00000376492 NFASCO94856 1347 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 CCDC69A6NI79 296 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 C9IYK1 514 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 DDX39AO00148 427 aaKnown RBP14.94□□□□□ -0.02
CLCN6-205ENST00000376492 KLRC1P26715 233 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 KCNC3Q14003 757 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 TYW1BQ6NUM6 668 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 ANKRD54Q6NXT1 300 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 SYCE2Q6PIF2 218 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 TMTC3Q6ZXV5 915 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 SLC24A5Q71RS6 500 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 SGMS1Q86VZ5 419 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 ATOH1Q92858 354 aaPredicted RBP14.94□□□□□ -0.02
CLCN6-205ENST00000376492 TNPO1Q92973 898 aaKnown RBP14.94□□□□□ -0.02
CLCN6-205ENST00000376492 CWH43Q9H720 699 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 AGO4Q9HCK5 861 aaKnown RBP14.94□□□□□ -0.02
CLCN6-205ENST00000376492 RGS18Q9NS28 235 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 C1orf112Q9NSG2 853 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 ST3GAL5Q9UNP4 418 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 SNX14Q9Y5W7 946 aa14.94□□□□□ -0.02
CLCN6-205ENST00000376492 HIDE1A8MVS5 230 aa14.93□□□□□ -0.02
CLCN6-205ENST00000376492 ZBTB42B2RXF5 422 aa14.93□□□□□ -0.02
CLCN6-205ENST00000376492 H0Y858 1186 aa14.93□□□□□ -0.02
CLCN6-205ENST00000376492 ATG7O95352 703 aa14.93□□□□□ -0.02
CLCN6-205ENST00000376492 CALM1P0DP23 149 aa14.93□□□□□ -0.02
CLCN6-205ENST00000376492 CALM2P0DP24 149 aa14.93□□□□□ -0.02
CLCN6-205ENST00000376492 CALM3P0DP25 149 aa14.93□□□□□ -0.02
CLCN6-205ENST00000376492 PBX3P40426 434 aa14.93□□□□□ -0.02
CLCN6-205ENST00000376492 KIZQ2M2Z5 673 aa14.93□□□□□ -0.02
CLCN6-205ENST00000376492 WWC2Q6AWC2 1192 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms