RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 RFX6Q8HWS3 928 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 NDUFAF2Q8N183 169 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 WDR64B1ANS9 1081 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 RPLP2P05387 115 aaKnown RBP11.84□□□□□ -0.51
MDC1-201ENST00000376406 EIF3BP55884 814 aaKnown RBP11.84□□□□□ -0.51
MDC1-201ENST00000376406 EXOSC10Q01780 885 aaKnown RBP11.84□□□□□ -0.51
MDC1-201ENST00000376406 SF3B3Q15393 1217 aaKnown RBP11.84□□□□□ -0.51
MDC1-201ENST00000376406 FBXO38Q6PIJ6 1188 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 RMDN3Q96TC7 470 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 ZNF609O15014 1411 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 RGL2O15211 777 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 GJB4Q9NTQ9 266 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 PCIF1Q9H4Z3 704 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 PRR29P0C7W0 189 aa11.83□□□□□ -0.51
MDC1-201ENST00000376406 HDLBPQ00341 1268 aaKnown RBP11.83□□□□□ -0.51
MDC1-201ENST00000376406 ACAD9Q9H845 621 aa11.83□□□□□ -0.51
MDC1-201ENST00000376406 BARHL2Q9NY43 387 aa11.83□□□□□ -0.51
MDC1-201ENST00000376406 DR1Q01658 176 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 MTMR1Q13613 665 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 ARID5BQ14865 1188 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 CCDC38Q502W7 563 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 C1orf228Q6PIY5 440 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 NUDT18Q6ZVK8 323 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 CDKL2Q92772 493 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 VPS33BQ9H267 617 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 SEPT10Q9P0V9 454 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 PRCPP42785 496 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 BSPRYQ5W0U4 402 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 BZW1Q7L1Q6 419 aaKnown RBP11.83□□□□□ -0.52
MDC1-201ENST00000376406 HINFPQ9BQA5 517 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 MXD3Q9BW11 206 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 ABCB6Q9NP58 842 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 GDAQ9Y2T3 454 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 MUM1Q2TAK8 710 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 EMBQ6PCB8 327 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 OXER1Q8TDS5 423 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 TMEM47Q9BQJ4 181 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 MTFR1LQ9H019 292 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 SEL1LQ9UBV2 794 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 ANAPC5Q9UJX4 755 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 ATP8A1Q9Y2Q0 1164 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 TTLL3Q9Y4R7 772 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 SF3A3Q12874 501 aaKnown RBP eCLIP11.83□□□□□ -0.529e-7■■■■■ 44.5
MDC1-201ENST00000376406 ATG9AQ7Z3C6 839 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 RHOT2Q8IXI1 618 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 TIPINQ9BVW5 301 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 CCDC68Q9H2F9 335 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 NNTQ13423 1086 aa11.83□□□□□ -0.52
MDC1-201ENST00000376406 C7orf31Q8N865 590 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.82□□□□□ -0.521e-6■■■■■ 31.4
MDC1-201ENST00000376406 DCP1AQ9NPI6 582 aaPredicted RBP11.82□□□□□ -0.52
MDC1-201ENST00000376406 CYP2D6P10635 497 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 RNF139Q8WU17 664 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 LRRC4Q9HBW1 653 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 RRP15Q9Y3B9 282 aaKnown RBP11.82□□□□□ -0.52
MDC1-201ENST00000376406 GSG1L2A8MUP6 293 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 RSBN1LQ6PCB5 846 aaPredicted RBP11.82□□□□□ -0.52
MDC1-201ENST00000376406 ARHGEF18Q6ZSZ5 1173 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 LBHD1Q9BQE6 289 aaPredicted RBP11.82□□□□□ -0.52
MDC1-201ENST00000376406 PCDHA6Q9UN73 950 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 PCDHA8Q9Y5H6 950 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 C3P01024 1663 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 PVALEFA0A1B0GWK0 134 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 H7C0C1 242 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 ORC4O43929 436 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 EVI5O60447 810 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 INHBAP08476 426 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 PNMA6AP0CW24 399 aaPredicted RBP11.82□□□□□ -0.52
MDC1-201ENST00000376406 ATP5OP48047 213 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 CNOT7Q9UIV1 285 aaKnown RBP11.82□□□□□ -0.52
MDC1-201ENST00000376406 MYL3P08590 195 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 PPARGP37231 505 aaPredicted RBP11.82□□□□□ -0.52
MDC1-201ENST00000376406 PLTPP55058 493 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 ZNF512BQ96KM6 892 aaPredicted RBP11.82□□□□□ -0.52
MDC1-201ENST00000376406 KIF28PB7ZC32 967 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 KBTBD13C9JR72 458 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 ENTPD3O75355 529 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 LIG3P49916 1009 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 ARL13BQ3SXY8 428 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 TRIM42Q8IWZ5 723 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 AGBL3Q8NEM8 1001 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 FMO2Q99518 471 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 PFASO15067 1338 aa11.82□□□□□ -0.52
MDC1-201ENST00000376406 MCF2LO15068 1137 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 HIP1RO75146 1068 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 KRT1P04264 644 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 SCP2P22307 547 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 MXI1P50539 228 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 ATP2C1P98194 919 aaPredicted RBP11.81□□□□□ -0.52
MDC1-201ENST00000376406 DHX9Q08211 1270 aaKnown RBP11.81□□□□□ -0.52
MDC1-201ENST00000376406 CAPN12Q6ZSI9 719 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 PPP1R12CQ9BZL4 782 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 ANO9A1A5B4 782 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 KCNQ4P56696 695 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 PHLDB3Q6NSJ2 640 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 TDRD3Q9H7E2 651 aaKnown RBP11.81□□□□□ -0.52
MDC1-201ENST00000376406 GPBP1L1Q9HC44 474 aaPredicted RBP11.81□□□□□ -0.52
MDC1-201ENST00000376406 CASQ2O14958 399 aaPredicted RBP11.81□□□□□ -0.52
MDC1-201ENST00000376406 CTTNQ14247 550 aaKnown RBP11.81□□□□□ -0.52
MDC1-201ENST00000376406 SHC4Q6S5L8 630 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms