RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 NAGPAQ9UK23 515 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 HDAC9Q9UKV0 1011 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 NOVA2Q9UNW9 492 aaKnown RBP15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 NOC2LQ9Y3T9 749 aaKnown RBP15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 MYH4Q9Y623 1939 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 SCN9AQ15858 1988 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 GPR75-ASB3A0A0A6YYF3 556 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 KRIT1O00522 736 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 GNA14O95837 355 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 NR2F2P24468 414 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 SMARCA1P28370 1054 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 TGFB2P61812 414 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 TTBK2Q6IQ55 1244 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 DPY19L2P1Q6NXN4 242 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 ALKBH5Q6P6C2 394 aaKnown RBP15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 FOXR2Q6PJQ5 311 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 LRIG3Q6UXM1 1119 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 CCDC65Q8IXS2 484 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 NLGN2Q8NFZ4 835 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 RBM46Q8TBY0 533 aaKnown RBP15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 LDHCP07864 332 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 UCHL3P15374 230 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 SLC16A2P36021 539 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 STAT3P40763 770 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 MARSP56192 900 aaKnown RBP15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 GSCP56915 257 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 RHBDL3P58872 404 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 CUL1Q13616 776 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 DACT2Q5SW24 774 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 ACTRT1Q8TDG2 376 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 PBKQ96KB5 322 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 AJAP1Q9UKB5 411 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 PGRMC1O00264 195 aaKnown RBP15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 CETN3O15182 167 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 TTI1O43156 1089 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 RAD17O75943 681 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 KRT18P05783 430 aaKnown RBP15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 ZBTB48P10074 688 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 CYP11B2P19099 503 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 IBSPP21815 317 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 ARSHQ5FYA8 562 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 GJB7Q6PEY0 223 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 TPCN2Q8NHX9 752 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 LRRC45Q96CN5 670 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 TRIM31Q9BZY9 425 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 DPH5Q9H2P9 285 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 JMJD4Q9H9V9 463 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 KLC4Q9NSK0 619 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 MAST2Q6P0Q8 1798 aa15.4■□□□□ 0.06
CLCNKA-202ENST00000375692 DNM1LO00429 736 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 TRAPPC3O43617 180 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 ATP2C2O75185 946 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 MAP2K2P36507 400 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 SETQ01105 290 aaPredicted RBP15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 DALRD3Q5D0E6 543 aaKnown RBP15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 CC2D2BQ6DHV5 1058 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 ARFGAP2Q8N6H7 521 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 OSBPL7Q9BZF2 842 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 SLC40A1Q9NP59 571 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 BCS1LQ9Y276 419 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 PON1P27169 355 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 MAGOHP61326 146 aaKnown RBP15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 SEPT2Q15019 361 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 CCDC121Q6ZUS5 278 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 PEX26Q7Z412 305 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 RTKN2Q8IZC4 609 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 ADGRF4Q8IZF3 695 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 LARGE2Q8N3Y3 721 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 RAPGEF5Q92565 580 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 MAGOHBQ96A72 148 aaKnown RBP15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 FAM163AQ96GL9 167 aaPredicted RBP15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 CCDC114Q96M63 670 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 BCAS3Q9H6U6 928 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 NR2E1Q9Y466 385 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 DDX60LQ5H9U9 1706 aaKnown RBP15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 COL4A5P29400 1685 aa15.39■□□□□ 0.05
CLCNKA-202ENST00000375692 BTNL10A8MVZ5 291 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 CES2O00748 559 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 SMTNP53814 917 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 PPP2R2AP63151 447 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 SF3A3Q12874 501 aaKnown RBP eCLIP15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 DCAF17Q5H9S7 520 aaPredicted RBP15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 STRIP1Q5VSL9 837 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 ILDR2Q71H61 639 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 MDM1Q8TC05 714 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 ZKSCAN4Q969J2 545 aaPredicted RBP15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 MTMR4Q9NYA4 1195 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 NAV1Q8NEY1 1877 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 GAKO14976 1311 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 POTEFA5A3E0 1075 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 PHF20L1A8MW92 1017 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 MED24O75448 989 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 RASSF9O75901 435 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 POTEIP0CG38 1075 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 CACNB3P54284 484 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 DHX9Q08211 1270 aaKnown RBP15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 PICALMQ13492 652 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 EXOC3L4Q17RC7 722 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms