RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 PRPHP41219 470 aa19.55■□□□□ 0.72
C6orf48-207ENST00000375642 FXR2P51116 673 aaKnown RBP eCLIP19.55■□□□□ 0.72
C6orf48-207ENST00000375642 CTTNQ14247 550 aaKnown RBP19.55■□□□□ 0.72
C6orf48-207ENST00000375642 PDIA5Q14554 519 aa19.55■□□□□ 0.72
C6orf48-207ENST00000375642 DTHD1Q6ZMT9 781 aa19.55■□□□□ 0.72
C6orf48-207ENST00000375642 C4orf19Q8IY42 314 aa19.55■□□□□ 0.72
C6orf48-207ENST00000375642 DNAJB3Q8WWF6 145 aa19.55■□□□□ 0.72
C6orf48-207ENST00000375642 KAT6AQ92794 2004 aa19.55■□□□□ 0.72
C6orf48-207ENST00000375642 RAB34Q9BZG1 259 aa19.55■□□□□ 0.72
C6orf48-207ENST00000375642 LTBP2Q14767 1821 aa19.55■□□□□ 0.72
C6orf48-207ENST00000375642 TRIP12Q14669 1992 aaPredicted RBP19.54■□□□□ 0.72
C6orf48-207ENST00000375642 SMIM35A0A1B0GVV1 85 aa19.54■□□□□ 0.72
C6orf48-207ENST00000375642 C22orf31O95567 290 aa19.54■□□□□ 0.72
C6orf48-207ENST00000375642 BMP15O95972 392 aa19.54■□□□□ 0.72
C6orf48-207ENST00000375642 PFKMP08237 780 aa19.54■□□□□ 0.72
C6orf48-207ENST00000375642 CTSHP09668 335 aa19.54■□□□□ 0.72
C6orf48-207ENST00000375642 ATP2C1P98194 919 aaPredicted RBP19.54■□□□□ 0.72
C6orf48-207ENST00000375642 PSRC1Q6PGN9 363 aaPredicted RBP19.54■□□□□ 0.72
C6orf48-207ENST00000375642 TRAF7Q6Q0C0 670 aa19.54■□□□□ 0.72
C6orf48-207ENST00000375642 ANO5Q75V66 913 aa19.54■□□□□ 0.72
C6orf48-207ENST00000375642 C16orf59Q7L2K0 433 aa19.54■□□□□ 0.72
C6orf48-207ENST00000375642 DEFB128Q7Z7B8 93 aa19.54■□□□□ 0.72
C6orf48-207ENST00000375642 WRAP73Q9P2S5 460 aaPredicted RBP19.54■□□□□ 0.72
C6orf48-207ENST00000375642 LRWD1Q9UFC0 647 aa19.54■□□□□ 0.72
C6orf48-207ENST00000375642 MYH9P35579 1960 aaKnown RBP19.53■□□□□ 0.72
C6orf48-207ENST00000375642 TMEM150BA6NC51 233 aa19.53■□□□□ 0.72
C6orf48-207ENST00000375642 YWHABP31946 246 aaKnown RBP19.53■□□□□ 0.72
C6orf48-207ENST00000375642 TBC1D8BQ0IIM8 1120 aa19.53■□□□□ 0.72
C6orf48-207ENST00000375642 SHHQ15465 462 aa19.53■□□□□ 0.72
C6orf48-207ENST00000375642 TARBP2Q15633 366 aaKnown RBP19.53■□□□□ 0.72
C6orf48-207ENST00000375642 MTERF2Q49AM1 385 aa19.53■□□□□ 0.72
C6orf48-207ENST00000375642 ZNF365Q70YC5 407 aa19.53■□□□□ 0.72
C6orf48-207ENST00000375642 OTUD6AQ7L8S5 288 aa19.53■□□□□ 0.72
C6orf48-207ENST00000375642 NME8Q8N427 588 aa19.53■□□□□ 0.72
C6orf48-207ENST00000375642 METTL13Q8N6R0 699 aa19.53■□□□□ 0.72
C6orf48-207ENST00000375642 FTOQ9C0B1 505 aaKnown RBP eCLIP19.53■□□□□ 0.72
C6orf48-207ENST00000375642 LYPLA2O95372 231 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 FGBP02675 491 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 ZSCAN22P10073 491 aaPredicted RBP19.52■□□□□ 0.72
C6orf48-207ENST00000375642 SF3A1Q15459 793 aaKnown RBP19.52■□□□□ 0.72
C6orf48-207ENST00000375642 FAM26DQ5JW98 314 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 TMEM240Q5SV17 173 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 C9orf50Q5SZB4 431 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 IER5Q5VY09 327 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 ARL6IP4Q66PJ3 421 aaKnown RBP19.52■□□□□ 0.72
C6orf48-207ENST00000375642 PLA2G4FQ68DD2 849 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 FAM173BQ6P4H8 233 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 KIAA0319LQ8IZA0 1049 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 IGSF22Q8N9C0 903 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 CEP170P1Q96L14 293 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.52■□□□□ 0.725e-24■□□□□ 9
C6orf48-207ENST00000375642 SH2D3AQ9BRG2 576 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 POLR3CQ9BUI4 534 aaPredicted RBP19.52■□□□□ 0.72
C6orf48-207ENST00000375642 TUFT1Q9NNX1 390 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 CYP26B1Q9NR63 512 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 STK24Q9Y6E0 443 aa19.52■□□□□ 0.72
C6orf48-207ENST00000375642 M0QZ92 97 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 NBNO60934 754 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 CHRNA1P02708 482 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 SPATA31C1P0DKV0 1188 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 TMOD1P28289 359 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 NPEPPSP55786 919 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 MRPS6P82932 125 aaKnown RBP19.51■□□□□ 0.71
C6orf48-207ENST00000375642 MBTPS1Q14703 1052 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 GPNMBQ14956 572 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 IL17AQ16552 155 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 FOXD4L5Q5VV16 416 aaPredicted RBP19.51■□□□□ 0.71
C6orf48-207ENST00000375642 HAUS3Q68CZ6 603 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 EFCAB12Q6NXP0 572 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 CATSPER3Q86XQ3 398 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 FOXD4L4Q8WXT5 416 aaPredicted RBP19.51■□□□□ 0.71
C6orf48-207ENST00000375642 VWCEQ96DN2 955 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 SUGCTQ9HAC7 445 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 PPME1Q9Y570 386 aa19.51■□□□□ 0.71
C6orf48-207ENST00000375642 MED24O75448 989 aa19.5■□□□□ 0.71
C6orf48-207ENST00000375642 CXCL10P02778 98 aa19.5■□□□□ 0.71
C6orf48-207ENST00000375642 RPA1P27694 616 aa19.5■□□□□ 0.71
C6orf48-207ENST00000375642 TMEM62Q0P6H9 643 aa19.5■□□□□ 0.71
C6orf48-207ENST00000375642 XKR9Q5GH70 373 aa19.5■□□□□ 0.71
C6orf48-207ENST00000375642 MAFAQ8NHW3 353 aaPredicted RBP19.5■□□□□ 0.71
C6orf48-207ENST00000375642 RNPC3Q96LT9 517 aaKnown RBP19.5■□□□□ 0.71
C6orf48-207ENST00000375642 CEP89Q96ST8 783 aa19.5■□□□□ 0.71
C6orf48-207ENST00000375642 JPH2Q9BR39 696 aaPredicted RBP19.5■□□□□ 0.71
C6orf48-207ENST00000375642 PRDM6Q9NQX0 595 aa19.5■□□□□ 0.71
C6orf48-207ENST00000375642 ANKEF1Q9NU02 776 aa19.5■□□□□ 0.71
C6orf48-207ENST00000375642 CLIC4Q9Y696 253 aa19.5■□□□□ 0.71
C6orf48-207ENST00000375642 CDY2AQ9Y6F7 541 aa19.5■□□□□ 0.71
C6orf48-207ENST00000375642 VWA3AA6NCI4 1184 aa19.49■□□□□ 0.71
C6orf48-207ENST00000375642 ZBTB39O15060 712 aa19.49■□□□□ 0.71
C6orf48-207ENST00000375642 MAFO75444 373 aaPredicted RBP19.49■□□□□ 0.71
C6orf48-207ENST00000375642 ACTN1P12814 892 aa19.49■□□□□ 0.71
C6orf48-207ENST00000375642 XRCC6P12956 609 aaKnown RBP eCLIP19.49■□□□□ 0.712e-19■■□□□ 12.1
C6orf48-207ENST00000375642 CCT6AP40227 531 aaKnown RBP19.49■□□□□ 0.71
C6orf48-207ENST00000375642 CLCN3P51790 818 aa19.49■□□□□ 0.71
C6orf48-207ENST00000375642 CEBPZQ03701 1054 aaKnown RBP19.49■□□□□ 0.71
C6orf48-207ENST00000375642 MGAT3Q09327 533 aa19.49■□□□□ 0.71
C6orf48-207ENST00000375642 KRT79Q5XKE5 535 aa19.49■□□□□ 0.71
C6orf48-207ENST00000375642 OTOP2Q7RTS6 562 aa19.49■□□□□ 0.71
C6orf48-207ENST00000375642 EXOC8Q8IYI6 725 aa19.49■□□□□ 0.71
C6orf48-207ENST00000375642 LRRC71Q8N4P6 559 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms