RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 PNMA3Q9UL41 463 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 TNRC6CQ9HCJ0 1690 aaKnown RBP9.88□□□□□ -0.83
UBR4-201ENST00000375218 COL24A1Q17RW2 1714 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 SNUPNO95149 360 aaKnown RBP9.88□□□□□ -0.83
UBR4-201ENST00000375218 KCNH1O95259 989 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 NF2P35240 595 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 ZAP70P43403 619 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 TBX2Q13207 712 aaPredicted RBP9.88□□□□□ -0.83
UBR4-201ENST00000375218 MTERF2Q49AM1 385 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 ALKBH5Q6P6C2 394 aaKnown RBP9.88□□□□□ -0.83
UBR4-201ENST00000375218 ANGPTL8Q6UXH0 198 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 HDAC7Q8WUI4 952 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 LEO1Q8WVC0 666 aaPredicted RBP9.88□□□□□ -0.83
UBR4-201ENST00000375218 CPLX3Q8WVH0 158 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 TBC1D5Q92609 795 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 CDHR5Q9HBB8 845 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 SLC5A4Q9NY91 659 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 NHSQ6T4R5 1651 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 ATP6V1G1O75348 118 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 BAG4O95429 457 aaKnown RBP9.87□□□□□ -0.83
UBR4-201ENST00000375218 ARPC4P59998 168 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 TUBA1BP68363 451 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 BEX3Q00994 111 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 ABCB5Q2M3G0 1257 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 METTL11BQ5VVY1 283 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 TUBA1AQ71U36 451 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 C16orf71Q8IYS4 520 aaPredicted RBP9.87□□□□□ -0.83
UBR4-201ENST00000375218 KCTD13Q8WZ19 329 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 FAM163AQ96GL9 167 aaPredicted RBP9.87□□□□□ -0.83
UBR4-201ENST00000375218 WDR24Q96S15 920 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 LIN28AQ9H9Z2 209 aaKnown RBP9.87□□□□□ -0.83
UBR4-201ENST00000375218 LRP5O75197 1615 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 UQCRHLA0A096LP55 91 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 GNAT3A8MTJ3 354 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 CACNB4O00305 520 aaPredicted RBP9.87□□□□□ -0.83
UBR4-201ENST00000375218 ZBTB24O43167 697 aaPredicted RBP9.87□□□□□ -0.83
UBR4-201ENST00000375218 UQCRHP07919 91 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 SLC16A2P36021 539 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 PIP4K2AP48426 406 aaPredicted RBP9.87□□□□□ -0.83
UBR4-201ENST00000375218 VPS41P49754 854 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 NRLP54845 237 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 HECTD3Q5T447 861 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 HEATR6Q6AI08 1181 aaKnown RBP9.87□□□□□ -0.83
UBR4-201ENST00000375218 RAB12Q6IQ22 244 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 OLFM4Q6UX06 510 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 PASD1Q8IV76 773 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 MAP4K3Q8IVH8 894 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 NIFKQ9BYG3 293 aaKnown RBP9.87□□□□□ -0.83
UBR4-201ENST00000375218 ANLNQ9NQW6 1124 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 AKAP7Q9P0M2 348 aaPredicted RBP9.87□□□□□ -0.83
UBR4-201ENST00000375218 UBR3Q6ZT12 1888 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 BRINP1O60477 761 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 THEGLP0DJG4 465 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 ELF1P32519 619 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 ZBTB16Q05516 673 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 ODF1Q14990 250 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 SLC14A2Q15849 920 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 CNNM4Q6P4Q7 775 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 ELMSAN1Q6PJG2 1045 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 SLC41A1Q8IVJ1 513 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 LRRC47Q8N1G4 583 aaKnown RBP9.87□□□□□ -0.83
UBR4-201ENST00000375218 CRELD1Q96HD1 420 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 GMCL1Q96IK5 515 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 MEIS3Q99687 375 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 ACAT2Q9BWD1 397 aa9.87□□□□□ -0.83
UBR4-201ENST00000375218 PNMA6FA0A0J9YX94 578 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 NBPF26B4DH59 902 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 GSPT1P15170 499 aaKnown RBP9.86□□□□□ -0.83
UBR4-201ENST00000375218 PHKG2P15735 406 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 S100A5P33763 92 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 FMR1Q06787 632 aaKnown RBP eCLIP9.86□□□□□ -0.837e-8■■□□□ 14
UBR4-201ENST00000375218 TRIM28Q13263 835 aaKnown RBP9.86□□□□□ -0.83
UBR4-201ENST00000375218 LRP8Q14114 963 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 PTPN21Q16825 1174 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 LRRFIP1Q32MZ4 808 aaKnown RBP9.86□□□□□ -0.83
UBR4-201ENST00000375218 TWISTNBQ3B726 338 aaPredicted RBP9.86□□□□□ -0.83
UBR4-201ENST00000375218 NBPF14Q5TI25 921 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 CORO6Q6QEF8 472 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 NBPF15Q8N660 670 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 GJA10Q969M2 543 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 HERC2P3Q9BVR0 1158 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 PXDNLA1KZ92 1463 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 POLR3DP05423 398 aaPredicted RBP9.86□□□□□ -0.83
UBR4-201ENST00000375218 TPM1P09493 284 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 NR2C2P49116 596 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 TMPRSS15P98073 1019 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 KCNC4Q03721 635 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 KCNB1Q14721 858 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 RGS9BPQ6ZS82 235 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 TOGARAM2Q6ZUX3 1019 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 NOSTRINQ8IVI9 506 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 CBARPQ8N350 705 aaPredicted RBP9.86□□□□□ -0.83
UBR4-201ENST00000375218 DDX11Q96FC9 970 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 TSGA10Q9BZW7 698 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 CRLF2Q9HC73 371 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 GGA3Q9NZ52 723 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 PCDHGB6Q9Y5F9 930 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 NDUFB5O43674 189 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 ZBTB14O43829 449 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 TBX18O95935 607 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms