RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 IWS1Q96ST2 819 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 CHP1Q99653 195 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 STRA6Q9BX79 667 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 BCAS3Q9H6U6 928 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ZNHIT6Q9NWK9 470 aaKnown RBP19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 FBXO40Q9UH90 709 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 KCNH4Q9UQ05 1017 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 SFI1A8K8P3 1242 aa19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 IRF6O14896 467 aa19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 HIP1RO75146 1068 aa19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 RGS20O76081 388 aa19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 NR3C1P04150 777 aa19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 KCNA2P16389 499 aa19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 NMT1P30419 496 aaKnown RBP19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 FAM178BQ8IXR5 827 aa19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 DAW1Q8N136 415 aa19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ELP3Q9H9T3 547 aa19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ANKEF1Q9NU02 776 aa19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 DNAI1Q9UI46 699 aa19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 EPN1Q9Y6I3 576 aaPredicted RBP19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 PFASO15067 1338 aa19.82■□□□□ 0.76
HLA-DQB1-201ENST00000374943 TGFB1I1O43294 461 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 PPP1R37O75864 691 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 NDUFA10O95299 355 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 YWHABP31946 246 aaKnown RBP19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 KCNMA1Q12791 1236 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ALCAMQ13740 583 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 SMAP1Q8IYB5 467 aaPredicted RBP19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 CCDC170Q8IYT3 715 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 MOV10L1Q9BXT6 1211 aaKnown RBP19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 METTL14Q9HCE5 456 aaKnown RBP19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 PLAGL2Q9UPG8 496 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 PPIL2Q13356 520 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 UGCGQ16739 394 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 GNPTABQ3T906 1256 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ODR4Q5SWX8 454 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ACRBPQ8NEB7 543 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ZNF526Q8TF50 670 aaPredicted RBP19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 MMRN2Q9H8L6 949 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ARMCX3Q9UH62 379 aaPredicted RBP19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 PCDHB13Q9Y5F0 798 aa19.81■□□□□ 0.76
HLA-DQB1-201ENST00000374943 EPHB6O15197 1021 aa19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 FANCGO15287 622 aa19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 GADL1Q6ZQY3 521 aa19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 NEK11Q8NG66 645 aa19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 GOLGA5Q8TBA6 731 aa19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 BAP1Q92560 729 aa19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 OTUD5Q96G74 571 aa19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 MKNK1Q9BUB5 465 aa19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 POLD4Q9HCU8 107 aa19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 FAM207AQ9NSI2 230 aaPredicted RBP19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 BTBD7Q9P203 1132 aa19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 LARSQ9P2J5 1176 aaKnown RBP19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 PCDHA10Q9Y5I2 948 aa19.8■□□□□ 0.76
HLA-DQB1-201ENST00000374943 SPATA31C2B4DYI2 1134 aa19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 DKC1O60832 514 aaKnown RBP eCLIP19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 EPB41P11171 864 aaKnown RBP19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ICAM3P32942 547 aa19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 CYLC1P35663 651 aaPredicted RBP19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 GNG11P61952 73 aa19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 KCNA1Q09470 495 aa19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ZNF662Q6ZS27 426 aa19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 SMCR8Q8TEV9 937 aaPredicted RBP19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 CLMNQ96JQ2 1002 aa19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 CEP72Q9P209 647 aa19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ZNFX1Q9P2E3 1918 aaKnown RBP19.79■□□□□ 0.76
HLA-DQB1-201ENST00000374943 GLTPD2A6NH11 291 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 AKAP3O75969 853 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 KCNH2Q12809 1159 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ZC2HC1CQ53FD0 456 aaPredicted RBP19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 TMEM174Q8WUU8 243 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 SPATC1LQ9H0A9 340 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 NUCKS1Q9H1E3 243 aaKnown RBP19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ST6GALNAC4Q9H4F1 302 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 AGTPBP1Q9UPW5 1226 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 REXO2Q9Y3B8 237 aaKnown RBP19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 EIF3CLB5ME19 914 aaKnown RBP19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 PLS3P13797 630 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ERCC3P19447 782 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ARHGAP25P42331 645 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 IRX3P78415 501 aaPredicted RBP19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 MYBPC2Q14324 1141 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 STXBP2Q15833 593 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 HS2ST1Q7LGA3 356 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 SLC9A9Q8IVB4 645 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 CCDC155Q8N6L0 562 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ATP6V0A1Q93050 837 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 BORCS6Q96GS4 357 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 DRC1Q96MC2 740 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 CCDC43Q96MW1 224 aaKnown RBP19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 WDR24Q96S15 920 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 EIF3CQ99613 913 aaKnown RBP19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 GBP3Q9H0R5 595 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 JPH1Q9HDC5 661 aaPredicted RBP19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 LZTFL1Q9NQ48 299 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 DMAC2Q9NW81 257 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 MYO1AQ9UBC5 1043 aa19.78■□□□□ 0.76
HLA-DQB1-201ENST00000374943 BACH1O14867 736 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms