RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 NCDNQ9UBB6 729 aa6.79□□□□□ -1.32
PTPN3-202ENST00000374541 PCDHB15Q9Y5E8 787 aa6.79□□□□□ -1.32
PTPN3-202ENST00000374541 PCDHB13Q9Y5F0 798 aa6.79□□□□□ -1.32
PTPN3-202ENST00000374541 MARF1Q9Y4F3 1742 aaKnown RBP6.78□□□□□ -1.32
PTPN3-202ENST00000374541 CDC25BP30305 580 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 SLC16A2P36021 539 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 ATP6V1E1P36543 226 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 FLT3LGP49771 235 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 MMEL1Q495T6 779 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 HERC4Q5GLZ8 1057 aaPredicted RBP6.78□□□□□ -1.32
PTPN3-202ENST00000374541 TMTC3Q6ZXV5 915 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 TRIM50Q86XT4 487 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 GLYCTKQ8IVS8 523 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 MAP7D3Q8IWC1 876 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 ST13P4Q8IZP2 240 aaPredicted RBP6.78□□□□□ -1.32
PTPN3-202ENST00000374541 N4BP2L2Q92802 583 aaPredicted RBP6.78□□□□□ -1.32
PTPN3-202ENST00000374541 SERPINI1Q99574 410 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 BPIFB4P59827 614 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 DYNLL1P63167 89 aaKnown RBP6.78□□□□□ -1.32
PTPN3-202ENST00000374541 DGKDQ16760 1214 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 GALNT17Q6IS24 598 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 PDXDC1Q6P996 788 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 TTC30BQ8N4P2 665 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 CSGALNACT1Q8TDX6 532 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 SPDL1Q96EA4 605 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 PUS3Q9BZE2 481 aaKnown RBP6.78□□□□□ -1.32
PTPN3-202ENST00000374541 SATB2Q9UPW6 733 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 KDRP35968 1356 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 PI4K2BG5E9Z4 385 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 C2CD2LO14523 706 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 STAM2O75886 525 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 GOLGA8HP0CJ92 632 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 CD19P15391 556 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 YBX3P16989 372 aaKnown RBP eCLIP6.78□□□□□ -1.32
PTPN3-202ENST00000374541 PTPREP23469 700 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 RINT1Q6NUQ1 792 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 TTLL11Q8NHH1 800 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 PI4K2BQ8TCG2 481 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 GFM2Q969S9 779 aaKnown RBP6.78□□□□□ -1.32
PTPN3-202ENST00000374541 PSAPP07602 524 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 GSTA1P08263 222 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 GSTA2P09210 222 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 XRCC5P13010 732 aaKnown RBP6.78□□□□□ -1.32
PTPN3-202ENST00000374541 NNMTP40261 264 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 MAP2K5Q13163 448 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 EPHA10Q5JZY3 1008 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 NXNQ6DKJ4 435 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 PIK3AP1Q6ZUJ8 805 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.78□□□□□ -1.32
PTPN3-202ENST00000374541 USTQ9Y2C2 406 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 JRKLQ9Y4A0 524 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 HOXA2O43364 376 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 RPS6KA5O75582 802 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 LIG4P49917 911 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 SNAP25P60880 206 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 NR1H3Q13133 447 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 BEND3Q5T5X7 828 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 TSPYL6Q8N831 410 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 TRPM4Q8TD43 1214 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 MROH8Q9H579 483 aa6.78□□□□□ -1.32
PTPN3-202ENST00000374541 F8W8V4 182 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 BNIP3LO60238 219 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 TNNC2P02585 160 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 MYBP10242 640 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 CCL5P13501 91 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 MTX1Q13505 466 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 KRT81Q14533 505 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 CABP7Q86V35 215 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 NME8Q8N427 588 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 SH3RF3Q8TEJ3 882 aaPredicted RBP6.77□□□□□ -1.33
PTPN3-202ENST00000374541 STAMQ92783 540 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 PAWRQ96IZ0 340 aaKnown RBP6.77□□□□□ -1.33
PTPN3-202ENST00000374541 CCDC138Q96M89 665 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 GCOM2Q9BZD3 368 aaPredicted RBP6.77□□□□□ -1.33
PTPN3-202ENST00000374541 COPRSQ9NQ92 184 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 G3BP2Q9UN86 482 aaKnown RBP6.77□□□□□ -1.33
PTPN3-202ENST00000374541 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.77□□□□□ -1.33
PTPN3-202ENST00000374541 POLR2DO15514 142 aaKnown RBP6.77□□□□□ -1.33
PTPN3-202ENST00000374541 CREB3O43889 395 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 ENTPD3O75355 529 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 H2AFZP0C0S5 128 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 MX2P20592 715 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 CCL23P55773 120 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 PPATQ06203 517 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 LONRF3Q496Y0 759 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 TEDDM1Q5T9Z0 273 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 ADALQ6DHV7 355 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 MOB2Q70IA6 237 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 H2AFVQ71UI9 128 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 BBS5Q8N3I7 341 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 SNX19Q92543 992 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 INTS9Q9NV88 658 aaKnown RBP6.77□□□□□ -1.33
PTPN3-202ENST00000374541 PPP2R2CQ9Y2T4 447 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 C17orf102A2RUQ5 167 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 CAPN9O14815 690 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 NCAM2O15394 837 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 ABCD1P33897 745 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 LIG3P49916 1009 aa6.77□□□□□ -1.33
PTPN3-202ENST00000374541 EIF3BP55884 814 aaKnown RBP6.77□□□□□ -1.33
PTPN3-202ENST00000374541 PPIL2Q13356 520 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms