RNA–Protein interactions for RNA: ENST00000374257.5

PTBP3-205, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PTBP3, Length 7,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-205ENST00000374257 DDX12PQ92771 950 aa9.05□□□□□ -0.96
PTBP3-205ENST00000374257 TSNARE1Q96NA8 513 aa9.05□□□□□ -0.96
PTBP3-205ENST00000374257 SLC8A2Q9UPR5 921 aa9.05□□□□□ -0.96
PTBP3-205ENST00000374257 H3BRB1 525 aa9.05□□□□□ -0.96
PTBP3-205ENST00000374257 GAS2O43903 313 aaKnown RBP9.05□□□□□ -0.96
PTBP3-205ENST00000374257 USP2O75604 605 aaPredicted RBP9.05□□□□□ -0.96
PTBP3-205ENST00000374257 FARP2O94887 1054 aaPredicted RBP9.05□□□□□ -0.96
PTBP3-205ENST00000374257 PDE6CP51160 858 aa9.05□□□□□ -0.96
PTBP3-205ENST00000374257 TROAPQ12815 778 aa9.05□□□□□ -0.96
PTBP3-205ENST00000374257 RUFY4Q6ZNE9 571 aa9.05□□□□□ -0.96
PTBP3-205ENST00000374257 TMEM199Q8N511 208 aa9.05□□□□□ -0.96
PTBP3-205ENST00000374257 LINC00301Q8NCQ3 95 aa9.05□□□□□ -0.96
PTBP3-205ENST00000374257 TUT1Q9H6E5 874 aaKnown RBP9.05□□□□□ -0.96
PTBP3-205ENST00000374257 IFNKQ9P0W0 207 aa9.05□□□□□ -0.96
PTBP3-205ENST00000374257 ACTR2P61160 394 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 PDZD4Q76G19 769 aaPredicted RBP9.04□□□□□ -0.96
PTBP3-205ENST00000374257 SCN4BQ8IWT1 228 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 OXER1Q8TDS5 423 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 DHTKD1Q96HY7 919 aaPredicted RBP9.04□□□□□ -0.96
PTBP3-205ENST00000374257 PRMT7Q9NVM4 692 aaPredicted RBP9.04□□□□□ -0.96
PTBP3-205ENST00000374257 PCDHB4Q9Y5E5 795 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 SFI1A8K8P3 1242 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 NFIBO00712 420 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 CLIC2O15247 247 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 PPFIA4O75335 1185 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 PTPN14Q15678 1187 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 EFCAB12Q6NXP0 572 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 IGSF22Q8N9C0 903 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 BBXQ8WY36 941 aaPredicted RBP9.04□□□□□ -0.96
PTBP3-205ENST00000374257 GPR25O00155 361 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 ADCY5O95622 1261 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 EMC2Q15006 297 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 GSTA5Q7RTV2 222 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 ACAP3Q96P50 834 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 SLC38A7Q9NVC3 462 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 EYA4O95677 639 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 XPAP23025 273 aaPredicted RBP9.04□□□□□ -0.96
PTBP3-205ENST00000374257 PDIA5Q14554 519 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 CC2D1AQ6P1N0 951 aaPredicted RBP9.04□□□□□ -0.96
PTBP3-205ENST00000374257 FAM43AQ8N2R8 423 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 KIAA1468Q9P260 1216 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 POTEFA5A3E0 1075 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 ATP2A1O14983 1001 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 POTEIP0CG38 1075 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 SFMBT2Q5VUG0 894 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 POTEGQ6S5H5 508 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 POTEEQ6S8J3 1075 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 XXYLT1Q8NBI6 393 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 ALDH8A1Q9H2A2 487 aaPredicted RBP9.04□□□□□ -0.96
PTBP3-205ENST00000374257 A1CFQ9NQ94 594 aaKnown RBP9.04□□□□□ -0.96
PTBP3-205ENST00000374257 CREBZFQ9NS37 354 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 FAM207AQ9NSI2 230 aaPredicted RBP9.04□□□□□ -0.96
PTBP3-205ENST00000374257 SYNGAP1Q96PV0 1343 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 TTC39CQ8N584 583 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 SH3TC2Q8TF17 1288 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 ZMYND12Q9H0C1 365 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 NLRC4Q9NPP4 1024 aa9.04□□□□□ -0.96
PTBP3-205ENST00000374257 NLRP11P59045 1033 aaKnown RBP9.03□□□□□ -0.96
PTBP3-205ENST00000374257 NUDT18Q6ZVK8 323 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 LSM14BQ9BX40 385 aaKnown RBP9.03□□□□□ -0.96
PTBP3-205ENST00000374257 GOLGA8IPA6NC78 632 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 GOLGA8JA6NMD2 632 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 NSFP46459 744 aaKnown RBP9.03□□□□□ -0.96
PTBP3-205ENST00000374257 LONRF3Q496Y0 759 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 PPP4R3CPQ6ZMV5 832 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 BBS5Q8N3I7 341 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 TMEM143Q96AN5 459 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 SLC38A10Q9HBR0 1119 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 DPP7Q9UHL4 492 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 MTUS1Q9ULD2 1270 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.03□□□□□ -0.962e-6■■■■□ 20.5
PTBP3-205ENST00000374257 LARGE1O95461 756 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 ANTXR2P58335 489 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 ZRSR2Q15696 482 aaKnown RBP9.03□□□□□ -0.96
PTBP3-205ENST00000374257 EXOC3L4Q17RC7 722 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 SFR1Q86XK3 245 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 IKBKGQ9Y6K9 419 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 KIAA0391O15091 583 aaKnown RBP9.03□□□□□ -0.96
PTBP3-205ENST00000374257 MED7O43513 233 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 CIITAP33076 1130 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 ALDH5A1P51649 535 aaPredicted RBP9.03□□□□□ -0.96
PTBP3-205ENST00000374257 GPC3P51654 580 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 CUL4AQ13619 759 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 HAUS6Q7Z4H7 955 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 PXMP2Q9NR77 195 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.03□□□□□ -0.96
PTBP3-205ENST00000374257 MROH7Q68CQ1 1323 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 SPDYE16A6NNV3 312 aaPredicted RBP9.03□□□□□ -0.96
PTBP3-205ENST00000374257 AMHP03971 560 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 INTS8Q75QN2 995 aaKnown RBP9.03□□□□□ -0.96
PTBP3-205ENST00000374257 TRIM50Q86XT4 487 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 L3MBTL3Q96JM7 780 aaPredicted RBP9.03□□□□□ -0.96
PTBP3-205ENST00000374257 ANKEF1Q9NU02 776 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 RGL1Q9NZL6 768 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 MAD2L2Q9UI95 211 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 USTQ9Y2C2 406 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 PAXBP1Q9Y5B6 917 aa9.03□□□□□ -0.96
PTBP3-205ENST00000374257 TCRBV5S4A2TA0A5A2 114 aa9.02□□□□□ -0.96
PTBP3-205ENST00000374257 CASQ1P31415 396 aa9.02□□□□□ -0.96
PTBP3-205ENST00000374257 KIF11P52732 1056 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms