RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 AGTP01019 485 aa14.02□□□□□ -0.16
PRPF4-201ENST00000374198 SNRPA1P09661 255 aaKnown RBP14.02□□□□□ -0.16
PRPF4-201ENST00000374198 TPBGLP0DKB5 382 aa14.02□□□□□ -0.16
PRPF4-201ENST00000374198 PPP1R2P41236 205 aa14.02□□□□□ -0.16
PRPF4-201ENST00000374198 CNGA2Q16280 664 aa14.02□□□□□ -0.16
PRPF4-201ENST00000374198 C4orf32Q8N8J7 132 aa14.02□□□□□ -0.16
PRPF4-201ENST00000374198 SLC17A8Q8NDX2 589 aa14.02□□□□□ -0.16
PRPF4-201ENST00000374198 MAIP1Q8WWC4 291 aa14.02□□□□□ -0.16
PRPF4-201ENST00000374198 UTP4Q969X6 686 aaKnown RBP14.02□□□□□ -0.16
PRPF4-201ENST00000374198 FGD4Q96M96 766 aa14.02□□□□□ -0.16
PRPF4-201ENST00000374198 CTNNAL1Q9UBT7 734 aa14.02□□□□□ -0.16
PRPF4-201ENST00000374198 ARL2BPQ9Y2Y0 163 aa14.02□□□□□ -0.16
PRPF4-201ENST00000374198 TLR2O60603 784 aa14.02□□□□□ -0.17
PRPF4-201ENST00000374198 PEX11AO75192 247 aa14.02□□□□□ -0.17
PRPF4-201ENST00000374198 ITGA4P13612 1032 aa14.02□□□□□ -0.17
PRPF4-201ENST00000374198 SLC18A3Q16572 532 aa14.02□□□□□ -0.17
PRPF4-201ENST00000374198 PLEKHG4BQ96PX9 1271 aa14.02□□□□□ -0.17
PRPF4-201ENST00000374198 PLIN2Q99541 437 aa14.02□□□□□ -0.17
PRPF4-201ENST00000374198 PACSIN1Q9BY11 444 aa14.02□□□□□ -0.17
PRPF4-201ENST00000374198 UBE2OQ9C0C9 1292 aaKnown RBP14.02□□□□□ -0.17
PRPF4-201ENST00000374198 PABPC3Q9H361 631 aaKnown RBP14.02□□□□□ -0.17
PRPF4-201ENST00000374198 FGFR1OP2Q9NVK5 253 aa14.02□□□□□ -0.17
PRPF4-201ENST00000374198 CYP39A1Q9NYL5 469 aa14.02□□□□□ -0.17
PRPF4-201ENST00000374198 MYH1P12882 1939 aa14.02□□□□□ -0.17
PRPF4-201ENST00000374198 TCRBV5S4A2TA0A5A2 114 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 TSNAXIP1Q2TAA8 658 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 SFMBT2Q5VUG0 894 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 COL23A1Q86Y22 540 aaPredicted RBP14.01□□□□□ -0.17
PRPF4-201ENST00000374198 NEK9Q8TD19 979 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 PIGOQ8TEQ8 1089 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 SYN2Q92777 582 aaPredicted RBP14.01□□□□□ -0.17
PRPF4-201ENST00000374198 CELF4Q9BZC1 486 aaKnown RBP14.01□□□□□ -0.17
PRPF4-201ENST00000374198 ZMYND12Q9H0C1 365 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 SEMA6BQ9H3T3 888 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 SMIM23A6NLE4 172 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 PP2D1A8MPX8 630 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 PCCAP05165 728 aaPredicted RBP14.01□□□□□ -0.17
PRPF4-201ENST00000374198 C6orf118Q5T5N4 469 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 C1QTNF12Q5T7M4 302 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 DENND2CQ68D51 928 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 ARHGAP27Q6ZUM4 889 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.01□□□□□ -0.17
PRPF4-201ENST00000374198 ASAP3Q8TDY4 903 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 ATP8B4Q8TF62 1192 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 DNAJC9Q8WXX5 260 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 SLC52A2Q9HAB3 445 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 ETNK1Q9HBU6 452 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 NLRC4Q9NPP4 1024 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 MYH6P13533 1939 aa14.01□□□□□ -0.17
PRPF4-201ENST00000374198 A0A087X0T9 212 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 TCP11X1B4DZS4 312 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 CREB3O43889 395 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 UNC5CO95185 931 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 FAM228BP0C875 321 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 FCER1AP12319 257 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 PMS2P54278 862 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 IRGCQ6NXR0 463 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 LONP2Q86WA8 852 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 METTL13Q8N6R0 699 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 RNF25Q96BH1 459 aaPredicted RBP14□□□□□ -0.17
PRPF4-201ENST00000374198 FAM136AQ96C01 138 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 FBXO3Q9UK99 471 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 ATP6V0A2Q9Y487 856 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 RTL9Q8NET4 1388 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 PLEKHA8P1O95397 391 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 ZBTB48P10074 688 aaPredicted RBP14□□□□□ -0.17
PRPF4-201ENST00000374198 PARP6Q2NL67 630 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 FOXB2Q5VYV0 432 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 PHC3Q8NDX5 983 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14□□□□□ -0.17
PRPF4-201ENST00000374198 TRIM31Q9BZY9 425 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 GOPCQ9HD26 462 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 TFCP2L1Q9NZI6 479 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 PRKAG3Q9UGI9 489 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 LY75O60449 1722 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 BTNL10A8MVZ5 291 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 GSTA2P09210 222 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 UBA7P41226 1012 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 LMNB2Q03252 620 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 CENPPQ6IPU0 288 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 ENDOVQ8N8Q3 282 aaKnown RBP14□□□□□ -0.17
PRPF4-201ENST00000374198 LRRC15Q8TF66 581 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 GOLPH3Q9H4A6 298 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 PCDHGA4Q9Y5G9 962 aa14□□□□□ -0.17
PRPF4-201ENST00000374198 ABCB11O95342 1321 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 LOC102724428A0A0B4J2F2 783 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 PTDSS1P48651 473 aaKnown RBP13.99□□□□□ -0.17
PRPF4-201ENST00000374198 SIK1P57059 783 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 KCNMA1Q12791 1236 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 DTHD1Q6ZMT9 781 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 CROCCP2Q86T23 111 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 RASGEF1CQ8N431 466 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 DYDC1Q8WWB3 177 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 NUDCD1Q96RS6 583 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 TRIM51Q9BSJ1 452 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 CEP72Q9P209 647 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 SCOCQ9UIL1 159 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 MYH2Q9UKX2 1941 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 GSG1L2A8MUP6 293 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 MBD4O95243 580 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms