RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 PLA2G4BP0C869 781 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 APOBEC3FQ8IUX4 373 aaKnown RBP15.4■□□□□ 0.06
TRAF1-201ENST00000373887 TBC1D10CQ8IV04 446 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 SPZ1Q9BXG8 430 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 LARGE1O95461 756 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 ELF1P32519 619 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 KLHL29Q96CT2 875 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 DNAJC5Q9H3Z4 198 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 FAM8A1Q9UBU6 413 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 MCF2LO15068 1137 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 MOCS3O95396 460 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 PLS3P13797 630 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 PLCG1P19174 1290 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 CACTINQ8WUQ7 758 aaKnown RBP15.4■□□□□ 0.06
TRAF1-201ENST00000373887 TMEM260Q9NX78 707 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 PODNQ7Z5L7 613 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 PRPF38AQ8NAV1 312 aaKnown RBP15.39■□□□□ 0.05
TRAF1-201ENST00000373887 KCTD6Q8NC69 237 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 GANCQ8TET4 914 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 CEP95Q96GE4 821 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 STRBPQ96SI9 672 aaKnown RBP15.39■□□□□ 0.05
TRAF1-201ENST00000373887 MSTO1Q9BUK6 570 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 UBE2TQ9NPD8 197 aaPredicted RBP15.39■□□□□ 0.05
TRAF1-201ENST00000373887 DNAJC17Q9NVM6 304 aaKnown RBP15.39■□□□□ 0.05
TRAF1-201ENST00000373887 TEKT2Q9UIF3 430 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 GDAQ9Y2T3 454 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 MT-ND3P03897 115 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 BLVRAP53004 296 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 RUNDC3BQ96NL0 473 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 RPF1Q9H9Y2 349 aaKnown RBP15.39■□□□□ 0.05
TRAF1-201ENST00000373887 PACSIN2Q9UNF0 486 aaPredicted RBP15.39■□□□□ 0.05
TRAF1-201ENST00000373887 MYO3BQ8WXR4 1341 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 FTCDO95954 541 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 ANXA13P27216 316 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 RBL2Q08999 1139 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 STXBP2Q15833 593 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 DAAM1Q9Y4D1 1078 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 RGS12O14924 1447 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 KIF19Q2TAC6 998 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 SPATA1Q5VX52 437 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 ATG16L1Q676U5 607 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 TUBGCP2Q9BSJ2 902 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 DENND3A2RUS2 1198 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 ECEL1O95672 775 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 LMNB2Q03252 620 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 PCGF5Q86SE9 256 aa15.39■□□□□ 0.05
TRAF1-201ENST00000373887 KRT33BQ14525 404 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 NCLNQ969V3 563 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 MRFAP1L1Q96HT8 127 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 NR1H4Q96RI1 486 aaPredicted RBP15.38■□□□□ 0.05
TRAF1-201ENST00000373887 CPSF3Q9UKF6 684 aaKnown RBP15.38■□□□□ 0.05
TRAF1-201ENST00000373887 PYCARDQ9ULZ3 195 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 ALKQ9UM73 1620 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 CTNND1O60716 968 aaKnown RBP15.38■□□□□ 0.05
TRAF1-201ENST00000373887 HMGCS2P54868 508 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 RC3H1Q5TC82 1133 aaKnown RBP15.38■□□□□ 0.05
TRAF1-201ENST00000373887 LINC00116Q8NCU8 138 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 TMEM47Q9BQJ4 181 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 CALN1Q9BXU9 219 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 CLTCL1P53675 1640 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 PRPF3O43395 683 aaKnown RBP15.38■□□□□ 0.05
TRAF1-201ENST00000373887 CYB5R4Q7L1T6 521 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 TRIM42Q8IWZ5 723 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 CEP70Q8NHQ1 597 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 RNF146Q9NTX7 359 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 MROH7-TTC4A0A0A0MT08 1334 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 TET3O43151 1660 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 LAD1O00515 517 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 GAP43P17677 238 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 FBXW4P57775 412 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 KIF23Q02241 960 aaPredicted RBP15.38■□□□□ 0.05
TRAF1-201ENST00000373887 TBCCQ15814 346 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 EZH2Q15910 746 aaKnown RBP15.38■□□□□ 0.05
TRAF1-201ENST00000373887 GRAMD1BQ3KR37 738 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 OR6B2Q6IFH4 312 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 TRAIPQ9BWF2 469 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 NRBP1Q9UHY1 535 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 PCDHA5Q9Y5H7 936 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 GFPT2O94808 682 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 AFPP02771 609 aaKnown RBP15.38■□□□□ 0.05
TRAF1-201ENST00000373887 ADRA2BP18089 450 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 NSUN2Q08J23 767 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRAF1-201ENST00000373887 SIRT2Q8IXJ6 389 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 DCAF4Q8WV16 495 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 MTRQ99707 1265 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 BHMT2Q9H2M3 363 aa15.38■□□□□ 0.05
TRAF1-201ENST00000373887 ETF1P62495 437 aaKnown RBP15.37■□□□□ 0.05
TRAF1-201ENST00000373887 OCRLQ01968 901 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 APBA1Q02410 837 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 ZNF394Q53GI3 561 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 GLE1Q53GS7 698 aaKnown RBP15.37■□□□□ 0.05
TRAF1-201ENST00000373887 NUDCD1Q96RS6 583 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 PARVGQ9HBI0 331 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 CNOT7Q9UIV1 285 aaKnown RBP15.37■□□□□ 0.05
TRAF1-201ENST00000373887 FEM1BQ9UK73 627 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 EXOC8Q8IYI6 725 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 LMCD1Q9NZU5 365 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 ZNF157P51786 506 aaPredicted RBP15.37■□□□□ 0.05
TRAF1-201ENST00000373887 HDLBPQ00341 1268 aaKnown RBP15.37■□□□□ 0.05
TRAF1-201ENST00000373887 MYO1EQ12965 1108 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms