RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 FGFR1OP2Q9NVK5 253 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 IGSF1Q8N6C5 1336 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 HSPA9P38646 679 aaKnown RBP11.5□□□□□ -0.57
TRERF1-203ENST00000372917 CCDC174Q6PII3 467 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 SHC4Q6S5L8 630 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 C11orf74Q86VG3 221 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 SCAIQ8N9R8 606 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 HNRNPABQ99729 332 aaKnown RBP11.5□□□□□ -0.57
TRERF1-203ENST00000372917 MLXIPQ9HAP2 919 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 SELENONQ9NZV5 590 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 TSKSQ9UJT2 592 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 TSPOAP1O95153 1857 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 SNX3O60493 162 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 CTDNEP1O95476 244 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 UBXN1Q04323 297 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 PTK7Q13308 1070 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 SPA17Q15506 151 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 GPR162Q16538 588 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 CFAP221Q4G0U5 840 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 INTS8Q75QN2 995 aaKnown RBP11.49□□□□□ -0.57
TRERF1-203ENST00000372917 CABP7Q86V35 215 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 DDX42Q86XP3 938 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRERF1-203ENST00000372917 GATA6Q92908 595 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 CCDC42Q96M95 316 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 UIMC1Q96RL1 719 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 MAK16Q9BXY0 300 aaKnown RBP11.49□□□□□ -0.57
TRERF1-203ENST00000372917 TKTP29401 623 aaKnown RBP11.49□□□□□ -0.57
TRERF1-203ENST00000372917 PLCD1P51178 756 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 KIF11P52732 1056 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 SEPT6Q14141 434 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 ZNF449Q6P9G9 518 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 PATL1Q86TB9 770 aaKnown RBP11.49□□□□□ -0.57
TRERF1-203ENST00000372917 GPIHBP1Q8IV16 184 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 FITM2Q8N6M3 262 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 PCMTD1Q96MG8 357 aaPredicted RBP11.49□□□□□ -0.57
TRERF1-203ENST00000372917 NUP85Q9BW27 656 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 STK33Q9BYT3 514 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 FAM32AQ9Y421 112 aaKnown RBP11.49□□□□□ -0.57
TRERF1-203ENST00000372917 PRR36Q9H6K5 1346 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 FBP2O00757 339 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 OR6B1O95007 311 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 IFIT1P09914 478 aaKnown RBP11.49□□□□□ -0.57
TRERF1-203ENST00000372917 NAA20P61599 178 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 TTC39AQ5SRH9 613 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 COPS6Q7L5N1 327 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 ERLEC1Q96DZ1 483 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 LRWD1Q9UFC0 647 aa11.49□□□□□ -0.57
TRERF1-203ENST00000372917 MYH8P13535 1937 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 PLEKHG3A1L390 1219 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 TSPY2A6NKD2 308 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 APOEP02649 317 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 TSPY3P0CV98 308 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 TSPY8P0CW00 308 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 TSPY1Q01534 308 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 LRRC14Q15048 493 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 CERKLQ49MI3 558 aaPredicted RBP11.48□□□□□ -0.57
TRERF1-203ENST00000372917 SPATA1Q5VX52 437 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 METTL21CQ5VZV1 264 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 KLHL35Q6PF15 583 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 DHX32Q7L7V1 743 aaKnown RBP11.48□□□□□ -0.57
TRERF1-203ENST00000372917 SMYD4Q8IYR2 804 aaPredicted RBP11.48□□□□□ -0.57
TRERF1-203ENST00000372917 UTP4Q969X6 686 aaKnown RBP11.48□□□□□ -0.57
TRERF1-203ENST00000372917 MAML3Q96JK9 1138 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 DCLRE1BQ9H816 532 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 MOSPD1Q9UJG1 213 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 PASKQ96RG2 1323 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 BDNFP23560 247 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 SERPINB8P50452 374 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 CDK7P50613 346 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 PDCD4Q53EL6 469 aaKnown RBP11.48□□□□□ -0.57
TRERF1-203ENST00000372917 EAF2Q96CJ1 260 aaPredicted RBP11.48□□□□□ -0.57
TRERF1-203ENST00000372917 MED15Q96RN5 788 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 HEPHQ9BQS7 1158 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 TCP11L1Q9NUJ3 509 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 TXLNGQ9NUQ3 528 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 CAPN6Q9Y6Q1 641 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 BIRC5O15392 142 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 RASA1P20936 1047 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 TARSP26639 723 aaKnown RBP11.48□□□□□ -0.57
TRERF1-203ENST00000372917 GALNTL6Q49A17 601 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 KSR2Q6VAB6 950 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 BPHLQ86WA6 291 aaPredicted RBP11.48□□□□□ -0.57
TRERF1-203ENST00000372917 ANKRD13CQ8N6S4 541 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 HAO1Q9UJM8 370 aa11.48□□□□□ -0.57
TRERF1-203ENST00000372917 ARIH1Q9Y4X5 557 aaPredicted RBP11.48□□□□□ -0.57
TRERF1-203ENST00000372917 GOLGA8BA8MQT2 603 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 CAPN9O14815 690 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 TEX28O15482 410 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 TAF5LO75529 589 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 EPHB2P29323 1055 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 EIF2B2P49770 351 aaKnown RBP11.47□□□□□ -0.57
TRERF1-203ENST00000372917 CDK17Q00537 523 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 UAP1Q16222 522 aaPredicted RBP11.47□□□□□ -0.57
TRERF1-203ENST00000372917 WDR78Q5VTH9 848 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 ASRGL1Q7L266 308 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 PSTPIP2Q9H939 334 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 KLHL14Q9P2G3 628 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 GPC6Q9Y625 555 aaPredicted RBP11.47□□□□□ -0.57
TRERF1-203ENST00000372917 TTC26A0AVF1 554 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 TCP11X1B4DZS4 312 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms