RNA–Protein interactions for RNA: ENST00000372858.7

PABPC4-203, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-203ENST00000372858 IFFO1Q0D2I5 559 aa18.05■□□□□ 0.48
PABPC4-203ENST00000372858 ANKRD20A8PQ5CZ79 823 aa18.05■□□□□ 0.48
PABPC4-203ENST00000372858 GPATCH4Q5T3I0 446 aaKnown RBP18.05■□□□□ 0.48
PABPC4-203ENST00000372858 GKAP1Q5VSY0 366 aaPredicted RBP18.05■□□□□ 0.48
PABPC4-203ENST00000372858 SLFN11Q7Z7L1 901 aa18.05■□□□□ 0.48
PABPC4-203ENST00000372858 DAAM2Q86T65 1068 aa18.05■□□□□ 0.48
PABPC4-203ENST00000372858 SYCE1Q8N0S2 351 aa18.05■□□□□ 0.48
PABPC4-203ENST00000372858 RBM46Q8TBY0 533 aaKnown RBP18.05■□□□□ 0.48
PABPC4-203ENST00000372858 DPH5Q9H2P9 285 aa18.05■□□□□ 0.48
PABPC4-203ENST00000372858 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
PABPC4-203ENST00000372858 STXBP5LQ9Y2K9 1186 aa18.04■□□□□ 0.48
PABPC4-203ENST00000372858 DAGLAQ9Y4D2 1042 aa18.04■□□□□ 0.48
PABPC4-203ENST00000372858 DCDC2CA8MYV0 355 aa18.04■□□□□ 0.48
PABPC4-203ENST00000372858 USP17L10C9JJH3 530 aa18.04■□□□□ 0.48
PABPC4-203ENST00000372858 ANXA13P27216 316 aa18.04■□□□□ 0.48
PABPC4-203ENST00000372858 GABPAQ06546 454 aa18.04■□□□□ 0.48
PABPC4-203ENST00000372858 FUKQ8N0W3 1084 aa18.04■□□□□ 0.48
PABPC4-203ENST00000372858 CELF4Q9BZC1 486 aaKnown RBP18.04■□□□□ 0.48
PABPC4-203ENST00000372858 SWAP70Q9UH65 585 aa18.04■□□□□ 0.48
PABPC4-203ENST00000372858 TNRC6CQ9HCJ0 1690 aaKnown RBP18.04■□□□□ 0.48
PABPC4-203ENST00000372858 AHDC1Q5TGY3 1603 aaPredicted RBP18.04■□□□□ 0.48
PABPC4-203ENST00000372858 PHF20L1A8MW92 1017 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 F8VZ95 297 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 XRCC5P13010 732 aaKnown RBP18.03■□□□□ 0.48
PABPC4-203ENST00000372858 SNCBQ16143 134 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 SPRED3Q2MJR0 410 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 CYB5D1Q6P9G0 228 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 KCTD1Q719H9 257 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 NT5DC3Q86UY8 548 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 PARP9Q8IXQ6 854 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 GIMAP7Q8NHV1 300 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 SEC14L1Q92503 715 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 TATDN2Q93075 761 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 PSMD1Q99460 953 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 TACO1Q9BSH4 297 aaKnown RBP18.03■□□□□ 0.48
PABPC4-203ENST00000372858 SERPINB13Q9UIV8 391 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 A0A0A6YYK5 440 aaPredicted RBP18.03■□□□□ 0.48
PABPC4-203ENST00000372858 DCAF17Q5H9S7 520 aaPredicted RBP18.03■□□□□ 0.48
PABPC4-203ENST00000372858 TRAF3IP3Q9Y228 551 aa18.03■□□□□ 0.48
PABPC4-203ENST00000372858 IGKV6D-41A0A0C4DH26 115 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 USP17L15C9J2P7 530 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 USP17L13C9JLJ4 530 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 USP17L11C9JVI0 530 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 USP17L18D6R9N7 530 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 USP17L22D6RA61 530 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 USP17L17D6RBQ6 530 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 USP17L19D6RCP7 530 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 USP17L20D6RJB6 530 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 MPHOSPH10O00566 681 aaKnown RBP18.02■□□□□ 0.48
PABPC4-203ENST00000372858 USP17L24Q0WX57 530 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 NEDD9Q14511 834 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 KNOP1Q1ED39 458 aaKnown RBP18.02■□□□□ 0.48
PABPC4-203ENST00000372858 PREPLQ4J6C6 727 aaPredicted RBP18.02■□□□□ 0.48
PABPC4-203ENST00000372858 ARSHQ5FYA8 562 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 TCERG1LQ5VWI1 586 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 USP17L6PQ6QN14 398 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 CCDC50Q8IVM0 306 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 U2AF1L4Q8WU68 220 aaKnown RBP18.02■□□□□ 0.48
PABPC4-203ENST00000372858 SGSM3Q96HU1 749 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 TRIM31Q9BZY9 425 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 CNOT10Q9H9A5 744 aaKnown RBP18.02■□□□□ 0.48
PABPC4-203ENST00000372858 AMFRQ9UKV5 643 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 ATP8A1Q9Y2Q0 1164 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 MYH7BA7E2Y1 1941 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 PITPNM2Q9BZ72 1349 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 FRMD3A2A2Y4 597 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 C6orf229H3BNL8 230 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 RAD21O60216 631 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 ATP2C2O75185 946 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 SCTRP47872 440 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 CASP5P51878 434 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 EIF3BP55884 814 aaKnown RBP18.02■□□□□ 0.48
PABPC4-203ENST00000372858 GLT8D2Q9H1C3 349 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 HAUS2Q9NVX0 235 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 INTUQ9ULD6 942 aa18.02■□□□□ 0.48
PABPC4-203ENST00000372858 NPEPPSP55786 919 aa18.02■□□□□ 0.47
PABPC4-203ENST00000372858 GTF2IP78347 998 aa18.02■□□□□ 0.47
PABPC4-203ENST00000372858 BYSLQ13895 437 aaKnown RBP18.02■□□□□ 0.47
PABPC4-203ENST00000372858 LACTB2Q53H82 288 aaPredicted RBP18.02■□□□□ 0.47
PABPC4-203ENST00000372858 P3H4Q92791 437 aa18.02■□□□□ 0.47
PABPC4-203ENST00000372858 HES6Q96HZ4 224 aa18.02■□□□□ 0.47
PABPC4-203ENST00000372858 FMO2Q99518 471 aa18.02■□□□□ 0.47
PABPC4-203ENST00000372858 DHX36Q9H2U1 1008 aaKnown RBP18.02■□□□□ 0.47
PABPC4-203ENST00000372858 POTEFA5A3E0 1075 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 F8W031 263 aaPredicted RBP18.01■□□□□ 0.47
PABPC4-203ENST00000372858 DDX3XO00571 662 aaKnown RBP eCLIP18.01■□□□□ 0.475e-7■□□□□ 11.1
PABPC4-203ENST00000372858 FGGP02679 453 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 POTEIP0CG38 1075 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 STAT3P40763 770 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 SLC12A3P55017 1021 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 EPHA7Q15375 998 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 POTEGQ6S5H5 508 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 POTEEQ6S8J3 1075 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 SLFN12Q8IYM2 578 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 MDM1Q8TC05 714 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 NENFQ9UMX5 172 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 SLC26A4O43511 780 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 CALUO43852 315 aaPredicted RBP18.01■□□□□ 0.47
PABPC4-203ENST00000372858 MED24O75448 989 aa18.01■□□□□ 0.47
PABPC4-203ENST00000372858 DRD4P21917 467 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms