RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 AADACL2Q6P093 401 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 HOOK3Q86VS8 718 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 RBM46Q8TBY0 533 aaKnown RBP13.03□□□□□ -0.32
SNX21-205ENST00000372547 CNOT10Q9H9A5 744 aaKnown RBP13.03□□□□□ -0.32
SNX21-205ENST00000372547 FAM114A2Q9NRY5 505 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 CCDC87Q9NVE4 849 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNX21-205ENST00000372547 TOGARAM1Q9Y4F4 1720 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 RAD21O60216 631 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 FGFR4P22455 802 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 GCKP35557 465 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 PMS2P54278 862 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 KCNQ4P56696 695 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 DR1Q01658 176 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 PARP10Q53GL7 1025 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 SPDL1Q96EA4 605 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 CALR3Q96L12 384 aaKnown RBP13.02□□□□□ -0.32
SNX21-205ENST00000372547 EYA3Q99504 573 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 GPCPD1Q9NPB8 672 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 DBR1Q9UK59 544 aaKnown RBP13.02□□□□□ -0.32
SNX21-205ENST00000372547 AMFRQ9UKV5 643 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 AGAP1Q9UPQ3 857 aa13.02□□□□□ -0.32
SNX21-205ENST00000372547 A0A1B0GUL6 1792 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 POTEB3A0JP26 581 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 TMEM110-MUSTN1A8MSY1 372 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 A8MUI8 341 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 POTECB2RU33 542 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 DIAPH2O60879 1101 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 CAMTA2O94983 1202 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 PAEPP09466 180 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 TLDC1Q6P9B6 456 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 POTEBQ6S5H4 581 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 TRPM8Q7Z2W7 1104 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 CCDC65Q8IXS2 484 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 MICAL1Q8TDZ2 1067 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 EPS8L3Q8TE67 593 aaKnown RBP13.02□□□□□ -0.33
SNX21-205ENST00000372547 AGAP11Q8TF27 550 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 SCFD1Q8WVM8 642 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 DNAJC5Q9H3Z4 198 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 SLITRK6Q9H5Y7 841 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 ERVK-5Q9HDB9 667 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 AJAP1Q9UKB5 411 aaPredicted RBP13.02□□□□□ -0.33
SNX21-205ENST00000372547 DAAM1Q9Y4D1 1078 aa13.02□□□□□ -0.33
SNX21-205ENST00000372547 LRP5O75197 1615 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 UBOX5O94941 541 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 RASA1P20936 1047 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNX21-205ENST00000372547 ADCY7P51828 1080 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 CASP5P51878 434 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 INTS5Q6P9B9 1019 aaKnown RBP13.01□□□□□ -0.33
SNX21-205ENST00000372547 MAEAQ7L5Y9 396 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 SLC51AQ86UW1 340 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 VPS36Q86VN1 386 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 FMNL3Q8IVF7 1028 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 FBXO25Q8TCJ0 367 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 NEK9Q8TD19 979 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 LMBR1Q8WVP7 490 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 LRRC27Q9C0I9 530 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 BSDC1Q9NW68 430 aaPredicted RBP13.01□□□□□ -0.33
SNX21-205ENST00000372547 TMOD4Q9NZQ9 345 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 ARMCX3Q9UH62 379 aaPredicted RBP13.01□□□□□ -0.33
SNX21-205ENST00000372547 PPP1R9AQ9ULJ8 1098 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 PCDHA12Q9UN75 941 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 CLIC2O15247 247 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 GHRP10912 638 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 GALCP54803 685 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 ADCY1Q08828 1119 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 NT5DC3Q86UY8 548 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 CLEC10AQ8IUN9 316 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 GLYCTKQ8IVS8 523 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 ZNF317Q96PQ6 595 aaPredicted RBP13.01□□□□□ -0.33
SNX21-205ENST00000372547 SEMA4AQ9H3S1 761 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 DDX25Q9UHL0 483 aaKnown RBP13.01□□□□□ -0.33
SNX21-205ENST00000372547 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 ANKRD36CQ5JPF3 1778 aa13.01□□□□□ -0.33
SNX21-205ENST00000372547 CCDC88AQ3V6T2 1871 aa13□□□□□ -0.33
SNX21-205ENST00000372547 DLEC1Q9Y238 1755 aa13□□□□□ -0.33
SNX21-205ENST00000372547 MEIS1O00470 390 aa13□□□□□ -0.33
SNX21-205ENST00000372547 GNA14O95837 355 aa13□□□□□ -0.33
SNX21-205ENST00000372547 PLA2G4BP0C869 781 aa13□□□□□ -0.33
SNX21-205ENST00000372547 PON1P27169 355 aa13□□□□□ -0.33
SNX21-205ENST00000372547 STAT3P40763 770 aa13□□□□□ -0.33
SNX21-205ENST00000372547 CCNHP51946 323 aaPredicted RBP13□□□□□ -0.33
SNX21-205ENST00000372547 MAP2K1Q02750 393 aaPredicted RBP13□□□□□ -0.33
SNX21-205ENST00000372547 ZKSCAN8Q15776 578 aaPredicted RBP13□□□□□ -0.33
SNX21-205ENST00000372547 FBXO33Q7Z6M2 555 aa13□□□□□ -0.33
SNX21-205ENST00000372547 LRRC47Q8N1G4 583 aaKnown RBP13□□□□□ -0.33
SNX21-205ENST00000372547 ATP8B4Q8TF62 1192 aa13□□□□□ -0.33
SNX21-205ENST00000372547 RNF25Q96BH1 459 aaPredicted RBP13□□□□□ -0.33
SNX21-205ENST00000372547 TLCD1Q96CP7 247 aa13□□□□□ -0.33
SNX21-205ENST00000372547 CEP63Q96MT8 703 aa13□□□□□ -0.33
SNX21-205ENST00000372547 SPZ1Q9BXG8 430 aa13□□□□□ -0.33
SNX21-205ENST00000372547 RAB17Q9H0T7 212 aa13□□□□□ -0.33
SNX21-205ENST00000372547 CHORDC1Q9UHD1 332 aaPredicted RBP13□□□□□ -0.33
SNX21-205ENST00000372547 PTPN22Q9Y2R2 807 aa13□□□□□ -0.33
SNX21-205ENST00000372547 FOXO6A8MYZ6 492 aa13□□□□□ -0.33
SNX21-205ENST00000372547 CES2O00748 559 aa13□□□□□ -0.33
SNX21-205ENST00000372547 UPP2O95045 317 aa13□□□□□ -0.33
SNX21-205ENST00000372547 AFPP02771 609 aaKnown RBP13□□□□□ -0.33
SNX21-205ENST00000372547 XRCC5P13010 732 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms