RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 NIFKQ9BYG3 293 aaKnown RBP28.24■■■□□ 2.11
C9orf50-201ENST00000372478 COLQQ9Y215 455 aaPredicted RBP28.24■■■□□ 2.11
C9orf50-201ENST00000372478 VWA3AA6NCI4 1184 aa28.23■■■□□ 2.11
C9orf50-201ENST00000372478 PP2D1A8MPX8 630 aa28.23■■■□□ 2.11
C9orf50-201ENST00000372478 MED24O75448 989 aa28.23■■■□□ 2.11
C9orf50-201ENST00000372478 SPATA31C1P0DKV0 1188 aa28.23■■■□□ 2.11
C9orf50-201ENST00000372478 FOXD4L6Q3SYB3 417 aaPredicted RBP28.23■■■□□ 2.11
C9orf50-201ENST00000372478 TRAF7Q6Q0C0 670 aa28.23■■■□□ 2.11
C9orf50-201ENST00000372478 FOXD4L3Q6VB84 417 aaPredicted RBP28.23■■■□□ 2.11
C9orf50-201ENST00000372478 IGSF22Q8N9C0 903 aa28.23■■■□□ 2.11
C9orf50-201ENST00000372478 ERMNQ8TAM6 284 aa28.23■■■□□ 2.11
C9orf50-201ENST00000372478 USP28Q96RU2 1077 aa28.23■■■□□ 2.11
C9orf50-201ENST00000372478 ARID2Q68CP9 1835 aa28.23■■■□□ 2.11
C9orf50-201ENST00000372478 BMP15O95972 392 aa28.22■■■□□ 2.11
C9orf50-201ENST00000372478 ACRP10323 421 aa28.22■■■□□ 2.11
C9orf50-201ENST00000372478 PPIGQ13427 754 aaKnown RBP eCLIP28.22■■■□□ 2.11
C9orf50-201ENST00000372478 PDIA5Q14554 519 aa28.22■■■□□ 2.11
C9orf50-201ENST00000372478 TARBP2Q15633 366 aaKnown RBP28.22■■■□□ 2.11
C9orf50-201ENST00000372478 CATSPER3Q86XQ3 398 aa28.22■■■□□ 2.11
C9orf50-201ENST00000372478 RAB34Q9BZG1 259 aa28.22■■■□□ 2.11
C9orf50-201ENST00000372478 PRO3102Q9H379 93 aa28.22■■■□□ 2.11
C9orf50-201ENST00000372478 A0A087WWV3 80 aa28.21■■■□□ 2.11
C9orf50-201ENST00000372478 YWHABP31946 246 aaKnown RBP28.21■■■□□ 2.11
C9orf50-201ENST00000372478 NPEPPSP55786 919 aa28.21■■■□□ 2.11
C9orf50-201ENST00000372478 PTPAQ15257 358 aa28.21■■■□□ 2.11
C9orf50-201ENST00000372478 ARL6IP4Q66PJ3 421 aaKnown RBP28.21■■■□□ 2.11
C9orf50-201ENST00000372478 DEFB128Q7Z7B8 93 aa28.21■■■□□ 2.11
C9orf50-201ENST00000372478 ZNF579Q8NAF0 562 aaKnown RBP28.21■■■□□ 2.11
C9orf50-201ENST00000372478 SIP14410 1827 aa28.21■■■□□ 2.11
C9orf50-201ENST00000372478 CDC25AP30304 524 aa28.21■■■□□ 2.11
C9orf50-201ENST00000372478 METTL13Q8N6R0 699 aa28.21■■■□□ 2.11
C9orf50-201ENST00000372478 POLR3CQ9BUI4 534 aaPredicted RBP28.21■■■□□ 2.11
C9orf50-201ENST00000372478 TUFT1Q9NNX1 390 aa28.21■■■□□ 2.11
C9orf50-201ENST00000372478 SMIM35A0A1B0GVV1 85 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 RSPH10B2B2RC85 870 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 RSPH10BP0C881 870 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 BMP8BP34820 402 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 CCT6AP40227 531 aaKnown RBP28.2■■■□□ 2.1
C9orf50-201ENST00000372478 TBC1D8BQ0IIM8 1120 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 TMEM62Q0P6H9 643 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 C16orf59Q7L2K0 433 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 RSPH3Q86UC2 560 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 TET1Q8NFU7 2136 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 VWCEQ96DN2 955 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 CEP89Q96ST8 783 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 IL23AQ9NPF7 189 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 ZDHHC9Q9Y397 364 aa28.2■■■□□ 2.1
C9orf50-201ENST00000372478 RANBP2P49792 3224 aaKnown RBP28.19■■■□□ 2.1
C9orf50-201ENST00000372478 MAGEB2O15479 319 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 LYPLA2O95372 231 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 RPA1P27694 616 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 MBTPS1Q14703 1052 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 GPNMBQ14956 572 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 HAUS3Q68CZ6 603 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 POTEGQ6S5H5 508 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 RPAINQ86UA6 219 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 LRRC71Q8N4P6 559 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 SNX29Q8TEQ0 813 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 PIGOQ8TEQ8 1089 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 CEP170P1Q96L14 293 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 CYP26B1Q9NR63 512 aa28.19■■■□□ 2.1
C9orf50-201ENST00000372478 TFIP11Q9UBB9 837 aaKnown RBP28.19■■■□□ 2.1
C9orf50-201ENST00000372478 CAND2O75155 1236 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 BRD1O95696 1058 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 MARCKSP29966 332 aaPredicted RBP28.18■■■□□ 2.1
C9orf50-201ENST00000372478 CLCN3P51790 818 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 C9orf50Q5SZB4 431 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 EFCAB12Q6NXP0 572 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 OTUD6AQ7L8S5 288 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 KIAA0319LQ8IZA0 1049 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 SUGCTQ9HAC7 445 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 LOXHD1Q8IVV2 1947 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 NBNO60934 754 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 GRIN1Q05586 938 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 ECM1Q16610 540 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 XKR9Q5GH70 373 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 ZNF396Q96N95 335 aaPredicted RBP28.18■■■□□ 2.1
C9orf50-201ENST00000372478 OSBPL7Q9BZF2 842 aa28.18■■■□□ 2.1
C9orf50-201ENST00000372478 CHRNA1P02708 482 aa28.17■■■□□ 2.1
C9orf50-201ENST00000372478 RFC2P35250 354 aa28.17■■■□□ 2.1
C9orf50-201ENST00000372478 MRPS6P82932 125 aaKnown RBP28.17■■■□□ 2.1
C9orf50-201ENST00000372478 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.17■■■□□ 2.1
C9orf50-201ENST00000372478 BMP2KQ9NSY1 1161 aaPredicted RBP28.17■■■□□ 2.1
C9orf50-201ENST00000372478 CDY2AQ9Y6F7 541 aa28.17■■■□□ 2.1
C9orf50-201ENST00000372478 SHHQ15465 462 aa28.16■■■□□ 2.1
C9orf50-201ENST00000372478 FAM26DQ5JW98 314 aa28.16■■■□□ 2.1
C9orf50-201ENST00000372478 KRT79Q5XKE5 535 aa28.16■■■□□ 2.1
C9orf50-201ENST00000372478 ZNF365Q70YC5 407 aa28.16■■■□□ 2.1
C9orf50-201ENST00000372478 RPUSD2Q8IZ73 545 aaKnown RBP28.16■■■□□ 2.1
C9orf50-201ENST00000372478 LINC01465Q8N7H1 131 aa28.16■■■□□ 2.1
C9orf50-201ENST00000372478 MMTAG2Q9BU76 263 aaKnown RBP28.16■■■□□ 2.1
C9orf50-201ENST00000372478 MGAT3Q09327 533 aa28.15■■■□□ 2.1
C9orf50-201ENST00000372478 TMEM240Q5SV17 173 aa28.15■■■□□ 2.1
C9orf50-201ENST00000372478 PPP1R16BQ96T49 567 aa28.15■■■□□ 2.1
C9orf50-201ENST00000372478 ANKEF1Q9NU02 776 aa28.15■■■□□ 2.1
C9orf50-201ENST00000372478 MAFO75444 373 aaPredicted RBP28.14■■■□□ 2.1
C9orf50-201ENST00000372478 VTNP04004 478 aa28.14■■■□□ 2.1
C9orf50-201ENST00000372478 NASPP49321 788 aaPredicted RBP28.14■■■□□ 2.1
C9orf50-201ENST00000372478 DRP2Q13474 957 aa28.14■■■□□ 2.1
C9orf50-201ENST00000372478 ZRSR1Q15695 479 aaKnown RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms