RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ANKRD42Q8N9B4 389 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 TMEM39BQ9GZU3 492 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 PIK3C2BO00750 1634 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 EIF3CLB5ME19 914 aaKnown RBP15.91■□□□□ 0.14
NDC1-201ENST00000371429 ZNF512BQ96KM6 892 aaPredicted RBP15.91■□□□□ 0.14
NDC1-201ENST00000371429 EIF3CQ99613 913 aaKnown RBP15.91■□□□□ 0.14
NDC1-201ENST00000371429 VCPKMTQ9H867 229 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 MKRN1Q9UHC7 482 aaKnown RBP15.91■□□□□ 0.14
NDC1-201ENST00000371429 PVALEFA0A1B0GWK0 134 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 CIB2O75838 187 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 NR3C1P04150 777 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 GYS1P13807 737 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 GOLGA8FQ08AF8 430 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 GOLGA8DPQ0D2H9 430 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 LLGL1Q15334 1064 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 PPP4R1Q8TF05 950 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 MYO3AQ8NEV4 1616 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 KRT10P13645 584 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 VSIG1Q86XK7 387 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 POLR3FQ9H1D9 316 aaPredicted RBP15.9■□□□□ 0.14
NDC1-201ENST00000371429 JPH1Q9HDC5 661 aaPredicted RBP15.9■□□□□ 0.14
NDC1-201ENST00000371429 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.9■□□□□ 0.14
NDC1-201ENST00000371429 SLC8A2Q9UPR5 921 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 CCL15-CCL14A0A0B4J2E2 113 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 MCF2LO15068 1137 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 KDM6AO15550 1401 aaPredicted RBP15.9■□□□□ 0.14
NDC1-201ENST00000371429 ACTN1P12814 892 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 ZNF18P17022 549 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 EIF4A3P38919 411 aaKnown RBP15.9■□□□□ 0.14
NDC1-201ENST00000371429 STAT5BP51692 787 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 CCL15Q16663 113 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 ARL13BQ3SXY8 428 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 INTS5Q6P9B9 1019 aaKnown RBP15.9■□□□□ 0.14
NDC1-201ENST00000371429 CEP57Q86XR8 500 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 SCN4BQ8IWT1 228 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 OR6J1Q8NGC5 347 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 MTFR1LQ9H019 292 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 PTPN22Q9Y2R2 807 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 LRRD1A4D1F6 860 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 CELF2O95319 508 aaKnown RBP15.9■□□□□ 0.14
NDC1-201ENST00000371429 DYNLT1P63172 113 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 TSPY1Q01534 308 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 RPS6KA2Q15349 733 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 ZNF699Q32M78 642 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 ANKRD13AQ8IZ07 590 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 SRBD1Q8N5C6 995 aaKnown RBP15.9■□□□□ 0.14
NDC1-201ENST00000371429 KCTD6Q8NC69 237 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 SERPING1P05155 500 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 STX2P32856 288 aa15.9■□□□□ 0.14
NDC1-201ENST00000371429 GCLMP48507 274 aa15.89■□□□□ 0.14
NDC1-201ENST00000371429 TSTA3Q13630 321 aaPredicted RBP15.89■□□□□ 0.14
NDC1-201ENST00000371429 EPHA7Q15375 998 aa15.89■□□□□ 0.14
NDC1-201ENST00000371429 TCP11X2Q5H9J9 407 aa15.89■□□□□ 0.14
NDC1-201ENST00000371429 DNAAF3Q8N9W5 541 aa15.89■□□□□ 0.14
NDC1-201ENST00000371429 MGARPQ8TDB4 240 aa15.89■□□□□ 0.14
NDC1-201ENST00000371429 SCYL1Q96KG9 808 aa15.89■□□□□ 0.14
NDC1-201ENST00000371429 SEL1LQ9UBV2 794 aa15.89■□□□□ 0.14
NDC1-201ENST00000371429 CYP2B6P20813 491 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 CIITAP33076 1130 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 UHMK1Q8TAS1 419 aaKnown RBP15.89■□□□□ 0.13
NDC1-201ENST00000371429 STMN2Q93045 179 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 RUNDC3BQ96NL0 473 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 MRPL4Q9BYD3 311 aaKnown RBP15.89■□□□□ 0.13
NDC1-201ENST00000371429 NGRNQ9NPE2 291 aaKnown RBP15.89■□□□□ 0.13
NDC1-201ENST00000371429 OGFRQ9NZT2 677 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 TACC3Q9Y6A5 838 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 FRMPD1Q5SYB0 1578 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 DYNC1LI2O43237 492 aaPredicted RBP15.89■□□□□ 0.13
NDC1-201ENST00000371429 C6orf222P0C671 652 aaPredicted RBP15.89■□□□□ 0.13
NDC1-201ENST00000371429 ANKRD20A3Q5VUR7 823 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 EIF2AK1Q9BQI3 630 aaKnown RBP15.89■□□□□ 0.13
NDC1-201ENST00000371429 CEP170BQ9Y4F5 1589 aaPredicted RBP15.89■□□□□ 0.13
NDC1-201ENST00000371429 ENC1O14682 589 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 GGPS1O95749 300 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 GPC3P51654 580 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 COASYQ13057 564 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 TKFCQ3LXA3 575 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 SGO2Q562F6 1265 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 CEP85LQ5SZL2 805 aa15.89■□□□□ 0.13
NDC1-201ENST00000371429 PRDM5Q9NQX1 630 aaPredicted RBP15.89■□□□□ 0.13
NDC1-201ENST00000371429 NOC2LQ9Y3T9 749 aaKnown RBP15.89■□□□□ 0.13
NDC1-201ENST00000371429 INO80Q9ULG1 1556 aaPredicted RBP15.89■□□□□ 0.13
NDC1-201ENST00000371429 BNIP3LO60238 219 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 CETPP11597 493 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 ZNF131P52739 623 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 PDIA6Q15084 440 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 CCDC62Q6P9F0 684 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 MICALL1Q8N3F8 863 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 RILPQ96NA2 401 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 CASP1P29466 404 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 GBP1P32455 592 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 KRT31Q15323 416 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 GKAP1Q5VSY0 366 aaPredicted RBP15.88■□□□□ 0.13
NDC1-201ENST00000371429 SLC35F6Q8N357 371 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 NCOA3Q9Y6Q9 1424 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 SLC4A1P02730 911 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 GSTA1P08263 222 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 GSTA2P09210 222 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 C16orf86Q6ZW13 317 aa15.88■□□□□ 0.13
NDC1-201ENST00000371429 CYFIP1Q7L576 1253 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms