RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ODR4Q5SWX8 454 aa7.79□□□□□ -1.16
USP1-202ENST00000371146 CEP135Q66GS9 1140 aa7.79□□□□□ -1.16
USP1-202ENST00000371146 DNAJC14Q6Y2X3 702 aaPredicted RBP7.79□□□□□ -1.16
USP1-202ENST00000371146 ZNF771Q7L3S4 317 aaPredicted RBP7.79□□□□□ -1.16
USP1-202ENST00000371146 OTUD6AQ7L8S5 288 aa7.79□□□□□ -1.16
USP1-202ENST00000371146 MSL3Q8N5Y2 521 aaKnown RBP7.79□□□□□ -1.16
USP1-202ENST00000371146 C12orf42Q96LP6 360 aa7.79□□□□□ -1.16
USP1-202ENST00000371146 ERAP1Q9NZ08 941 aa7.79□□□□□ -1.16
USP1-202ENST00000371146 GJD2Q9UKL4 321 aa7.79□□□□□ -1.16
USP1-202ENST00000371146 NUB1Q9Y5A7 615 aa7.79□□□□□ -1.16
USP1-202ENST00000371146 CNOT1A5YKK6 2376 aaKnown RBP7.79□□□□□ -1.16
USP1-202ENST00000371146 SNED1Q8TER0 1413 aa7.79□□□□□ -1.16
USP1-202ENST00000371146 ADAMTS7Q9UKP4 1686 aa7.79□□□□□ -1.16
USP1-202ENST00000371146 IGKV6D-41A0A0C4DH26 115 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 PHACTR2O75167 634 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 F13A1P00488 732 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 PSEN2P49810 448 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 C11orf91Q3C1V1 193 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 RILPL1Q5EBL4 403 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 IQSEC1Q6DN90 963 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 CCDC60Q8IWA6 550 aaPredicted RBP7.78□□□□□ -1.16
USP1-202ENST00000371146 FAM133AQ8N9E0 248 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 TRPV1Q8NER1 839 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 MTG1Q9BT17 334 aaPredicted RBP7.78□□□□□ -1.16
USP1-202ENST00000371146 CSRNP2Q9H175 543 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 WNT7AO00755 349 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 SYKP43405 635 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 CBX1P83916 185 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 PKN2Q16513 984 aaKnown RBP7.78□□□□□ -1.16
USP1-202ENST00000371146 ICE2Q659A1 982 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 SASS6Q6UVJ0 657 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 DRC7Q8IY82 874 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 UNC45AQ9H3U1 944 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 SMARCAD1Q9H4L7 1026 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 MRPL44Q9H9J2 332 aaKnown RBP7.78□□□□□ -1.16
USP1-202ENST00000371146 SLC28A3Q9HAS3 691 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 MYO5AQ9Y4I1 1855 aaKnown RBP7.78□□□□□ -1.16
USP1-202ENST00000371146 BECN2A8MW95 431 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 SLC16A4O15374 487 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 DLATP10515 647 aaKnown RBP7.78□□□□□ -1.16
USP1-202ENST00000371146 CYP2J2P51589 502 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 MOGSQ13724 837 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 UVSSAQ2YD98 709 aa7.78□□□□□ -1.16
USP1-202ENST00000371146 TNPO1Q92973 898 aaKnown RBP7.78□□□□□ -1.16
USP1-202ENST00000371146 CALR3Q96L12 384 aaKnown RBP7.78□□□□□ -1.16
USP1-202ENST00000371146 DDX41Q9UJV9 622 aaKnown RBP7.78□□□□□ -1.16
USP1-202ENST00000371146 ADAMTSL1Q8N6G6 1762 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 A0A087WZ62 844 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 EML1O00423 815 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 CLIC2O15247 247 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 DUSP11O75319 330 aaKnown RBP7.77□□□□□ -1.17
USP1-202ENST00000371146 GNAT1P11488 350 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 QARSP47897 775 aaKnown RBP7.77□□□□□ -1.17
USP1-202ENST00000371146 BIRC3Q13489 604 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 DUSP28Q4G0W2 176 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 SMYD4Q8IYR2 804 aaPredicted RBP7.77□□□□□ -1.17
USP1-202ENST00000371146 DBF4BQ8NFT6 615 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 KIF2CQ99661 725 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 EIF2AK1Q9BQI3 630 aaKnown RBP7.77□□□□□ -1.17
USP1-202ENST00000371146 FDXACB1Q9BRP7 624 aaPredicted RBP7.77□□□□□ -1.17
USP1-202ENST00000371146 SLC39A2Q9NP94 309 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 SUCLA2Q9P2R7 463 aaPredicted RBP7.77□□□□□ -1.17
USP1-202ENST00000371146 MORF4L1Q9UBU8 362 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 PNMA2Q9UL42 364 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 SYNRGQ9UMZ2 1314 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 A0A1W2PQ45 241 aaPredicted RBP7.77□□□□□ -1.17
USP1-202ENST00000371146 A0A1W2PQY0 241 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 RSPH10B2B2RC85 870 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 K7ENM7 598 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 HNRNPDLO14979 420 aaKnown RBP7.77□□□□□ -1.17
USP1-202ENST00000371146 MSCO60682 206 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 RSPH10BP0C881 870 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 CD52P31358 61 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 NTRK3Q16288 839 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 TAF12Q16514 161 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 HAUS3Q68CZ6 603 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 LMBRD2Q68DH5 695 aaPredicted RBP7.77□□□□□ -1.17
USP1-202ENST00000371146 SYMPKQ92797 1274 aaKnown RBP7.77□□□□□ -1.17
USP1-202ENST00000371146 ELMO3Q96BJ8 720 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 CTAGE5O15320 804 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 ZC3H11AO75152 810 aaKnown RBP eCLIP7.77□□□□□ -1.17
USP1-202ENST00000371146 POMCP01189 267 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 RFX1P22670 979 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 STRN3Q13033 797 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 GRIK4Q16099 956 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 METTL7BQ6UX53 244 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 LPPQ93052 612 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 CPB2Q96IY4 423 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 RPS6KC1Q96S38 1066 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 VTA1Q9NP79 307 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 POLR3EQ9NVU0 708 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 PCDHB13Q9Y5F0 798 aa7.77□□□□□ -1.17
USP1-202ENST00000371146 ANKRD36CQ5JPF3 1778 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 RFXAPO00287 272 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 ADCY6O43306 1168 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 PPFIA4O75335 1185 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 KRT76Q01546 638 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 AP3B2Q13367 1082 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 LRRC26Q2I0M4 334 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 NFRKBQ6P4R8 1299 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms