RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 TRIM50Q86XT4 487 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 ANKRD13BQ86YJ7 626 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 SLC7A5P1Q8MH63 180 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 DEPTORQ8TB45 409 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 ATRIPQ8WXE1 791 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 ABHD8Q96I13 439 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 RNPC3Q96LT9 517 aaKnown RBP11.81□□□□□ -0.52
TWNK-202ENST00000370228 SRPK1Q96SB4 655 aaKnown RBP11.81□□□□□ -0.52
TWNK-202ENST00000370228 TCHPQ9BT92 498 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 EXOC1Q9NV70 894 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 TACC3Q9Y6A5 838 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 SALL1Q9NSC2 1324 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 POLR2AP24928 1970 aaKnown RBP11.81□□□□□ -0.52
TWNK-202ENST00000370228 HTR3EA5X5Y0 456 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 USO1O60763 962 aaKnown RBP11.81□□□□□ -0.52
TWNK-202ENST00000370228 CCND1P24385 295 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 ARPC4P59998 168 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 WDR78Q5VTH9 848 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 TBC1D10CQ8IV04 446 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 CRACR2BQ8N4Y2 399 aaPredicted RBP11.81□□□□□ -0.52
TWNK-202ENST00000370228 EHBP1Q8NDI1 1231 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 ARL8AQ96BM9 186 aa11.81□□□□□ -0.52
TWNK-202ENST00000370228 MRPL44Q9H9J2 332 aaKnown RBP11.81□□□□□ -0.52
TWNK-202ENST00000370228 ATP1A3P13637 1013 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 VEGFAP15692 232 aaPredicted RBP11.8□□□□□ -0.52
TWNK-202ENST00000370228 VARSP26640 1264 aaKnown RBP11.8□□□□□ -0.52
TWNK-202ENST00000370228 MYL5Q02045 173 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 ZYXQ15942 572 aaKnown RBP11.8□□□□□ -0.52
TWNK-202ENST00000370228 P3H1Q32P28 736 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 KCTD17Q8N5Z5 321 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 SNX27Q96L92 541 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 MOV10L1Q9BXT6 1211 aaKnown RBP11.8□□□□□ -0.52
TWNK-202ENST00000370228 BAZ2AQ9UIF9 1905 aaKnown RBP11.8□□□□□ -0.52
TWNK-202ENST00000370228 B4E1Z4 1266 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 HNRNPCP07910 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
TWNK-202ENST00000370228 TROVE2P10155 538 aaKnown RBP eCLIP11.8□□□□□ -0.52
TWNK-202ENST00000370228 PFKFB1P16118 471 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 ITGA7Q13683 1181 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 HSP90AA4PQ58FG1 418 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 ZNF362Q5T0B9 420 aaPredicted RBP11.8□□□□□ -0.52
TWNK-202ENST00000370228 FOXB2Q5VYV0 432 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 ANO1Q5XXA6 986 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 HHIPL2Q6UWX4 724 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 RASGRP2Q7LDG7 609 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 DDX12PQ92771 950 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 HESX1Q9UBX0 185 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 PNMA2Q9UL42 364 aa11.8□□□□□ -0.52
TWNK-202ENST00000370228 LAMA2P24043 3122 aaKnown RBP11.8□□□□□ -0.52
TWNK-202ENST00000370228 ZNF213O14771 459 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 RXRAP19793 462 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 EXOSC10Q01780 885 aaKnown RBP11.79□□□□□ -0.52
TWNK-202ENST00000370228 KIF5AQ12840 1032 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 DGKZQ13574 1117 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 ZNF268Q14587 947 aaPredicted RBP11.79□□□□□ -0.52
TWNK-202ENST00000370228 TRIM68Q6AZZ1 485 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 PNMA8AQ86V59 439 aaPredicted RBP11.79□□□□□ -0.52
TWNK-202ENST00000370228 SULF1Q8IWU6 871 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 RSPH1Q8WYR4 309 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 DPF2Q92785 391 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 ADARB2Q9NS39 739 aaKnown RBP11.79□□□□□ -0.52
TWNK-202ENST00000370228 POLR3EQ9NVU0 708 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 RFX7Q2KHR2 1363 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 STX10O60499 249 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 ATP2C2O75185 946 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 TRIM29Q14134 588 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 TCERG1LQ5VWI1 586 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 OR52E8Q6IFG1 317 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 ZNF554Q86TJ5 538 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 LMNTD2Q8IXW0 634 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 ARHGAP18Q8N392 663 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.79□□□□□ -0.52
TWNK-202ENST00000370228 SREK1Q8WXA9 508 aaKnown RBP11.79□□□□□ -0.52
TWNK-202ENST00000370228 CCT6BQ92526 530 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 RNF25Q96BH1 459 aaPredicted RBP11.79□□□□□ -0.52
TWNK-202ENST00000370228 DCPSQ96C86 337 aaKnown RBP11.79□□□□□ -0.52
TWNK-202ENST00000370228 SLC39A3Q9BRY0 314 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 NACAP1Q9BZK3 213 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 VCX3BQ9H321 246 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 VCX3AQ9NNX9 186 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.79□□□□□ -0.52
TWNK-202ENST00000370228 QPCTLQ9NXS2 382 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 MYO3BQ8WXR4 1341 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 TARSL2A2RTX5 802 aaKnown RBP11.79□□□□□ -0.52
TWNK-202ENST00000370228 CTAGE9A4FU28 777 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 E7EVH7 732 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 HNRNPRO43390 633 aaKnown RBP11.79□□□□□ -0.52
TWNK-202ENST00000370228 PRC1O43663 620 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 TCF7P36402 384 aaPredicted RBP11.79□□□□□ -0.52
TWNK-202ENST00000370228 CD97P48960 835 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 CAMK2BQ13554 666 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 TMEM154Q6P9G4 183 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 ZNF784Q8NCA9 323 aaPredicted RBP11.79□□□□□ -0.52
TWNK-202ENST00000370228 RPS6KC1Q96S38 1066 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 VPS33BQ9H267 617 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 GAKO14976 1311 aa11.79□□□□□ -0.52
TWNK-202ENST00000370228 BOLA2-SMG1P6H3BVE0 249 aa11.78□□□□□ -0.52
TWNK-202ENST00000370228 NLRP5P59047 1200 aa11.78□□□□□ -0.52
TWNK-202ENST00000370228 SULT2A1Q06520 285 aa11.78□□□□□ -0.52
TWNK-202ENST00000370228 GSPT2Q8IYD1 628 aaKnown RBP11.78□□□□□ -0.52
TWNK-202ENST00000370228 DESI2Q9BSY9 194 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms