RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 CEP57Q86XR8 500 aa14.07□□□□□ -0.16
CHD1L-202ENST00000369258 CYFIP2Q96F07 1278 aa14.07□□□□□ -0.16
CHD1L-202ENST00000369258 CCDC114Q96M63 670 aa14.07□□□□□ -0.16
CHD1L-202ENST00000369258 VCPKMTQ9H867 229 aa14.07□□□□□ -0.16
CHD1L-202ENST00000369258 ZNF219Q9P2Y4 722 aaPredicted RBP14.07□□□□□ -0.16
CHD1L-202ENST00000369258 PCDHA2Q9Y5H9 948 aa14.07□□□□□ -0.16
CHD1L-202ENST00000369258 RREB1Q92766 1687 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 ATMINO43313 823 aaPredicted RBP14.06□□□□□ -0.16
CHD1L-202ENST00000369258 CALCAP01258 141 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 PON1P27169 355 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 NMT1P30419 496 aaKnown RBP14.06□□□□□ -0.16
CHD1L-202ENST00000369258 IFNAR2P48551 515 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 IKQ13123 557 aaPredicted RBP14.06□□□□□ -0.16
CHD1L-202ENST00000369258 PEX26Q7Z412 305 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 CCDC13Q8IYE1 715 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 BHMT2Q9H2M3 363 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 RIOX1Q9H6W3 641 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 HAUS2Q9NVX0 235 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 PKD2L1Q9P0L9 805 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 GMNCA6NCL1 334 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 GCNT3O95395 438 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 MARCKSL1P49006 195 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 CDR1P51861 262 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 CUL1Q13616 776 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 KRT71Q3SY84 523 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 TMEM119Q4V9L6 283 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 PHLDB2Q86SQ0 1253 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.06□□□□□ -0.16
CHD1L-202ENST00000369258 OSBPL7Q9BZF2 842 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 CCDC113Q9H0I3 377 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 KLC4Q9NSK0 619 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 PNMA2Q9UL42 364 aa14.06□□□□□ -0.16
CHD1L-202ENST00000369258 DNAH12Q6ZR08 3092 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 GOLGA6L7A0A1B0GV03 622 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 SMTNP53814 917 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 CTTNQ14247 550 aaKnown RBP14.05□□□□□ -0.16
CHD1L-202ENST00000369258 EXOC3L4Q17RC7 722 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 RUFY4Q6ZNE9 571 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 SCLT1Q96NL6 688 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 RUSC1Q9BVN2 902 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 CXorf56Q9H5V9 222 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 ZNF287Q9HBT7 754 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 GCNT4Q9P109 453 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 DDX20Q9UHI6 824 aaKnown RBP14.05□□□□□ -0.16
CHD1L-202ENST00000369258 DAGLAQ9Y4D2 1042 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 COL22A1Q8NFW1 1626 aaPredicted RBP14.05□□□□□ -0.16
CHD1L-202ENST00000369258 CHUKO15111 745 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 GNA14O95837 355 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 DDR1Q08345 913 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 PDIA5Q14554 519 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 ARHGEF26Q96DR7 871 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 PBKQ96KB5 322 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 CEP63Q96MT8 703 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.05□□□□□ -0.16
CHD1L-202ENST00000369258 NARFQ9UHQ1 456 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 GGA2Q9UJY4 613 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 TMEM59LQ9UK28 342 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 PCDHA1Q9Y5I3 950 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 CCDC88AQ3V6T2 1871 aa14.05□□□□□ -0.16
CHD1L-202ENST00000369258 SRRM3A6NNA2 597 aaPredicted RBP14.04□□□□□ -0.16
CHD1L-202ENST00000369258 DDX3XO00571 662 aaKnown RBP eCLIP14.04□□□□□ -0.161e-15■■■■□ 21.4
CHD1L-202ENST00000369258 CAND2O75155 1236 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 HOXA7P31268 230 aaPredicted RBP14.04□□□□□ -0.16
CHD1L-202ENST00000369258 CYP2J2P51589 502 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 DCAF12L1Q5VU92 463 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 BTBD6Q96KE9 485 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 AIPL1Q9NZN9 384 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 ARMCX3Q9UH62 379 aaPredicted RBP14.04□□□□□ -0.16
CHD1L-202ENST00000369258 CCNL1Q9UK58 526 aaPredicted RBP14.04□□□□□ -0.16
CHD1L-202ENST00000369258 PTPN22Q9Y2R2 807 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 SNX24Q9Y343 169 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 EIF4E1BA6NMX2 242 aaKnown RBP14.04□□□□□ -0.16
CHD1L-202ENST00000369258 FAM86B1E9PN63 330 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 H0YGN5 161 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 GDF11O95390 407 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 FAM86B2P0C5J1 330 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 CDC25CP30307 473 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 USP11P51784 963 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 PLTPP55058 493 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 IFI16Q16666 785 aaKnown RBP14.04□□□□□ -0.16
CHD1L-202ENST00000369258 SLC10A5Q5PT55 438 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 ZNF804AQ7Z570 1209 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 ZSWIM2Q8NEG5 633 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 TPCN2Q8NHX9 752 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 NFS1Q9Y697 457 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 LAMB1P07942 1786 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 DDX60LQ5H9U9 1706 aaKnown RBP14.04□□□□□ -0.16
CHD1L-202ENST00000369258 CETN3O15182 167 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 GALCP54803 685 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 BIRC3Q13489 604 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 QRICH1Q2TAL8 776 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 FOXR2Q6PJQ5 311 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 C6orf89Q6UWU4 347 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 OTUD6AQ7L8S5 288 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 SCFD2Q8WU76 684 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 RAPGEF5Q92565 580 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 C8orf37Q96NL8 207 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 POP1Q99575 1024 aaKnown RBP14.04□□□□□ -0.16
CHD1L-202ENST00000369258 SLC40A1Q9NP59 571 aa14.04□□□□□ -0.16
CHD1L-202ENST00000369258 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms