RNA–Protein interactions for RNA: ENST00000369063.7

RTN4IP1-201, Transcript of reticulon 4 interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4IP1, Length 1,682 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-201ENST00000369063 SEPT9Q9UHD8 586 aaPredicted RBP17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 TMEM150BA6NC51 233 aa17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 DDX11L8A8MPP1 907 aa17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 MAGEB2O15479 319 aa17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 PFKMP08237 780 aa17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 YWHABP31946 246 aaKnown RBP17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 SHHQ15465 462 aa17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 IL17AQ16552 155 aa17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 C9orf50Q5SZB4 431 aa17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 DTHD1Q6ZMT9 781 aa17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 CEP89Q96ST8 783 aa17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 FAM49AQ9H0Q0 323 aaPredicted RBP17.13■□□□□ 0.33
RTN4IP1-201ENST00000369063 NBNO60934 754 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 LYPLA2O95372 231 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 SPATA31C1P0DKV0 1188 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 MBTPS1Q14703 1052 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 FAM26DQ5JW98 314 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 TMEM240Q5SV17 173 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 ARL6IP4Q66PJ3 421 aaKnown RBP17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 FAM173BQ6P4H8 233 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 PSRC1Q6PGN9 363 aaPredicted RBP17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 ZNF365Q70YC5 407 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 DEFB128Q7Z7B8 93 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 CATSPER3Q86XQ3 398 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 KIAA0319LQ8IZA0 1049 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 NME8Q8N427 588 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 SH2D3AQ9BRG2 576 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 RAB34Q9BZG1 259 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 LRWD1Q9UFC0 647 aa17.12■□□□□ 0.33
RTN4IP1-201ENST00000369063 TRIOBPQ9H2D6 2365 aa17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 BMP15O95972 392 aa17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 CHRNA1P02708 482 aa17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 CTSHP09668 335 aa17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 DDIT3P35638 169 aa17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 TBC1D8BQ0IIM8 1120 aa17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 SF3A1Q15459 793 aaKnown RBP17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 MTERF2Q49AM1 385 aa17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 OTUD6AQ7L8S5 288 aa17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 METTL13Q8N6R0 699 aa17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 ERMNQ8TAM6 284 aa17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 POLR3CQ9BUI4 534 aaPredicted RBP17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 CYP26B1Q9NR63 512 aa17.11■□□□□ 0.33
RTN4IP1-201ENST00000369063 ZBTB39O15060 712 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 FGBP02675 491 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 CXCL10P02778 98 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 RPA1P27694 616 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 IER5Q5VY09 327 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 EFCAB12Q6NXP0 572 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 TUFT1Q9NNX1 390 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 TANC1Q9C0D5 1861 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 MED24O75448 989 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 ZSCAN22P10073 491 aaPredicted RBP17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 TMOD1P28289 359 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 NPEPPSP55786 919 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 MRPS6P82932 125 aaKnown RBP17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 PKP1Q13835 747 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 HABP4Q5JVS0 413 aaKnown RBP17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 HAUS3Q68CZ6 603 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 PLA2G4FQ68DD2 849 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 LINC01465Q8N7H1 131 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 CEP170P1Q96L14 293 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 PPME1Q9Y570 386 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 CLIC4Q9Y696 253 aa17.1■□□□□ 0.33
RTN4IP1-201ENST00000369063 SCN5AQ14524 2016 aa17.09■□□□□ 0.33
RTN4IP1-201ENST00000369063 IGKV6-21A0A0C4DH24 114 aa17.09■□□□□ 0.33
RTN4IP1-201ENST00000369063 VWA3AA6NCI4 1184 aa17.09■□□□□ 0.33
RTN4IP1-201ENST00000369063 MAFO75444 373 aaPredicted RBP17.09■□□□□ 0.33
RTN4IP1-201ENST00000369063 XRCC6P12956 609 aaKnown RBP eCLIP17.09■□□□□ 0.33
RTN4IP1-201ENST00000369063 MGAT3Q09327 533 aa17.09■□□□□ 0.33
RTN4IP1-201ENST00000369063 TMEM62Q0P6H9 643 aa17.09■□□□□ 0.33
RTN4IP1-201ENST00000369063 OTOP2Q7RTS6 562 aa17.09■□□□□ 0.33
RTN4IP1-201ENST00000369063 ZNF579Q8NAF0 562 aaKnown RBP17.09■□□□□ 0.33
RTN4IP1-201ENST00000369063 FTOQ9C0B1 505 aaKnown RBP eCLIP17.09■□□□□ 0.33
RTN4IP1-201ENST00000369063 SUGCTQ9HAC7 445 aa17.09■□□□□ 0.33
RTN4IP1-201ENST00000369063 STK24Q9Y6E0 443 aa17.09■□□□□ 0.33
RTN4IP1-201ENST00000369063 SZT2Q5T011 3432 aa17.08■□□□□ 0.33
RTN4IP1-201ENST00000369063 MUTP22033 750 aa17.08■□□□□ 0.32
RTN4IP1-201ENST00000369063 PTPAQ15257 358 aa17.08■□□□□ 0.32
RTN4IP1-201ENST00000369063 LRIT3Q3SXY7 679 aa17.08■□□□□ 0.32
RTN4IP1-201ENST00000369063 RASIP1Q5U651 963 aa17.08■□□□□ 0.32
RTN4IP1-201ENST00000369063 LRRC71Q8N4P6 559 aa17.08■□□□□ 0.32
RTN4IP1-201ENST00000369063 PIGOQ8TEQ8 1089 aa17.08■□□□□ 0.32
RTN4IP1-201ENST00000369063 HERVK_113Q902F9 699 aa17.08■□□□□ 0.32
RTN4IP1-201ENST00000369063 RNPC3Q96LT9 517 aaKnown RBP17.08■□□□□ 0.32
RTN4IP1-201ENST00000369063 OSBPL7Q9BZF2 842 aa17.08■□□□□ 0.32
RTN4IP1-201ENST00000369063 ANKEF1Q9NU02 776 aa17.08■□□□□ 0.32
RTN4IP1-201ENST00000369063 CDY2AQ9Y6F7 541 aa17.08■□□□□ 0.32
RTN4IP1-201ENST00000369063 TET1Q8NFU7 2136 aa17.08■□□□□ 0.32
RTN4IP1-201ENST00000369063 KDM3AQ9Y4C1 1321 aa17.07■□□□□ 0.32
RTN4IP1-201ENST00000369063 M0QZ92 97 aa17.07■□□□□ 0.32
RTN4IP1-201ENST00000369063 F13A1P00488 732 aa17.07■□□□□ 0.32
RTN4IP1-201ENST00000369063 CDC25AP30304 524 aa17.07■□□□□ 0.32
RTN4IP1-201ENST00000369063 CLCN3P51790 818 aa17.07■□□□□ 0.32
RTN4IP1-201ENST00000369063 NUCB2P80303 420 aa17.07■□□□□ 0.32
RTN4IP1-201ENST00000369063 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
RTN4IP1-201ENST00000369063 PLEKHG4Q58EX7 1191 aa17.07■□□□□ 0.32
RTN4IP1-201ENST00000369063 XKR9Q5GH70 373 aa17.07■□□□□ 0.32
RTN4IP1-201ENST00000369063 EXOC8Q8IYI6 725 aa17.07■□□□□ 0.32
RTN4IP1-201ENST00000369063 SLC7A3Q8WY07 619 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms