RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 EPC1Q9H2F5 836 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 TMEM206Q9H813 350 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 NLRC4Q9NPP4 1024 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 TBC1D7Q9P0N9 293 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 HDAC6Q9UBN7 1215 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 DBR1Q9UK59 544 aaKnown RBP11.19□□□□□ -0.62
TPM3-209ENST00000368527 DIS3Q9Y2L1 958 aaKnown RBP11.19□□□□□ -0.62
TPM3-209ENST00000368527 KIF13BQ9NQT8 1826 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 TNS1Q9HBL0 1735 aaKnown RBP11.18□□□□□ -0.62
TPM3-209ENST00000368527 ASTN1O14525 1302 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 SCN9AQ15858 1988 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 NPHP3-ACAD11A0A0J9YXS1 232 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 A0A1W2PRG0 241 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 ARHGEF35A5YM69 484 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 WDR46O15213 610 aaKnown RBP11.18□□□□□ -0.62
TPM3-209ENST00000368527 OPA1O60313 960 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 DKC1O60832 514 aaKnown RBP eCLIP11.18□□□□□ -0.62
TPM3-209ENST00000368527 SLITRK3O94933 977 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 LYPLA2O95372 231 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 PLEKP08567 350 aaPredicted RBP11.18□□□□□ -0.62
TPM3-209ENST00000368527 LMNB1P20700 586 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 SCP2P22307 547 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 EPHB4P54760 987 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 RASSF7Q02833 373 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 GFPT1Q06210 699 aaPredicted RBP11.18□□□□□ -0.62
TPM3-209ENST00000368527 ENPEPQ07075 957 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 KIAA0753Q2KHM9 967 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 B3GNT9Q6UX72 402 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 C12orf56Q8IXR9 622 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 FAM186BQ8IYM0 893 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 LARGE2Q8N3Y3 721 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 MYCT1Q8N699 235 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 PRPF38AQ8NAV1 312 aaKnown RBP11.18□□□□□ -0.62
TPM3-209ENST00000368527 GLIS3Q8NEA6 775 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 RDM1Q8NG50 284 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 TBC1D5Q92609 795 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 CAPZA3Q96KX2 299 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 MXRA8Q9BRK3 442 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 ZNF577Q9BSK1 485 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 PDE11AQ9HCR9 933 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 TBC1D22BQ9NU19 505 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 STIM2Q9P246 746 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 LARSQ9P2J5 1176 aaKnown RBP11.18□□□□□ -0.62
TPM3-209ENST00000368527 TCEAL9Q9UHQ7 104 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 KCNG1Q9UIX4 513 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 ZNRF3Q9ULT6 936 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 CAPN6Q9Y6Q1 641 aa11.18□□□□□ -0.62
TPM3-209ENST00000368527 RPTORQ8N122 1335 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 YDJCA8MPS7 323 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 TCP10L2B9ZVM9 353 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 PMM2O15305 246 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 POLR3GO15318 223 aaPredicted RBP11.17□□□□□ -0.62
TPM3-209ENST00000368527 TLR2O60603 784 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 P4HBP07237 508 aaKnown RBP11.17□□□□□ -0.62
TPM3-209ENST00000368527 IVLP07476 585 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 H2AFZP0C0S5 128 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 PON1P27169 355 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 CHRNA5P30532 468 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 HOXA13P31271 388 aaPredicted RBP11.17□□□□□ -0.62
TPM3-209ENST00000368527 PTGER2P43116 358 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 TNNT3P45378 269 aaPredicted RBP11.17□□□□□ -0.62
TPM3-209ENST00000368527 PSMC6P62333 389 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 RASA3Q14644 834 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 MUM1L1Q5H9M0 696 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 MEI1Q5TIA1 1274 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 MSL1Q68DK7 614 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 C8orf74Q6P047 294 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 SAMD1Q6SPF0 538 aaPredicted RBP11.17□□□□□ -0.62
TPM3-209ENST00000368527 H2AFVQ71UI9 128 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 ZNF720Q7Z2F6 126 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 IRF2BP2Q7Z5L9 587 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 LDHDQ86WU2 507 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 TPH2Q8IWU9 490 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 FAM178BQ8IXR5 827 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 NIM1KQ8IY84 436 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 CAVIN3Q969G5 261 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 CCDC102AQ96A19 550 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 SLC35C1Q96A29 364 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 HVCN1Q96D96 273 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 BORCS6Q96GS4 357 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 DYDC2Q96IM9 177 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 P2RX7Q99572 595 aaKnown RBP11.17□□□□□ -0.62
TPM3-209ENST00000368527 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.17□□□□□ -0.62
TPM3-209ENST00000368527 RUSC1Q9BVN2 902 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 TLR10Q9BXR5 811 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 STK33Q9BYT3 514 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 ST6GALNAC4Q9H4F1 302 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 MLXIPQ9HAP2 919 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 DMAC2Q9NW81 257 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 ADAM21Q9UKJ8 722 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 DUSP10Q9Y6W6 482 aa11.17□□□□□ -0.62
TPM3-209ENST00000368527 CNTNAP1P78357 1384 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 GOLGA8KD6RF30 607 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 IPO5O00410 1097 aaKnown RBP11.16□□□□□ -0.62
TPM3-209ENST00000368527 EML1O00423 815 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 SRGAP2O75044 1071 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 RPS6KA5O75582 802 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 AKAP3O75969 853 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 PRPF6O94906 941 aaKnown RBP11.16□□□□□ -0.62
TPM3-209ENST00000368527 MYBP10242 640 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms