RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 MROH2AA6NES4 1674 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 ITSN1Q15811 1721 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 CTAGE3PQ8IX95 158 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 TRIM11Q96F44 468 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 DAAM1Q9Y4D1 1078 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 KRT81Q14533 505 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 TBC1D16Q8TBP0 767 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 FBXO41Q8TF61 875 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 USP6NLQ92738 828 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 SENP2Q9HC62 589 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 THAP12O43422 761 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 ATF2P15336 505 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 MAPK4P31152 587 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 BFSP1Q12934 665 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 COASYQ13057 564 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 SEMA3FQ13275 785 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 ABCD1P33897 745 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 RNF207Q6ZRF8 634 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 PALM2Q8IXS6 379 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 GUF1Q8N442 669 aaKnown RBP14.31□□□□□ -0.12
PTPRK-204ENST00000368210 PBKQ96KB5 322 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 CENPKQ9BS16 269 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 RASSF10A6NK89 507 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 PSAPP07602 524 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 ACTN3Q08043 901 aaPredicted RBP14.31□□□□□ -0.12
PTPRK-204ENST00000368210 PPP2R5DQ14738 602 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 KCTD16Q68DU8 428 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 PDXDC2PQ6P474 469 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 LINC00116Q8NCU8 138 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 KCNB2Q92953 911 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 SPC25Q9HBM1 224 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 KLC4Q9NSK0 619 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 PSD3Q9NYI0 1048 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 SALL3Q9BXA9 1300 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 RIMBP3CA6NJZ7 1639 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 RIMBP3BA6NNM3 1639 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 RIMBP3Q9UFD9 1639 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 CCNA1P78396 465 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 VPS72Q15906 364 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 KAZNQ674X7 775 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 PRR5LQ6MZQ0 368 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 SDCCAG8Q86SQ7 713 aaPredicted RBP14.31□□□□□ -0.12
PTPRK-204ENST00000368210 CCDC125Q86Z20 511 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 SMC1BQ8NDV3 1235 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 USP27XA6NNY8 438 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 PEX3P56589 373 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 TTC19Q6DKK2 380 aaPredicted RBP14.31□□□□□ -0.12
PTPRK-204ENST00000368210 FBXO33Q7Z6M2 555 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 ARHGAP18Q8N392 663 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 BBOF1Q8ND07 529 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 KLHL29Q96CT2 875 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
PTPRK-204ENST00000368210 DAGLAQ9Y4D2 1042 aa14.31□□□□□ -0.12
PTPRK-204ENST00000368210 ENO4A6NNW6 628 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 EVI5O60447 810 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 RUNDC3BQ96NL0 473 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 CEP72Q9P209 647 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 TTC26A0AVF1 554 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 ZFXP17010 805 aaPredicted RBP14.3□□□□□ -0.12
PTPRK-204ENST00000368210 BSPRYQ5W0U4 402 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 CRAMP1Q96RY5 1269 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 CCSER1Q9C0I3 900 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 PTPN22Q9Y2R2 807 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 ADGRG1Q9Y653 693 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 NR3C1P04150 777 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 HNRNPCP07910 306 aaKnown RBP eCLIP14.3□□□□□ -0.125e-7■■□□□ 13
PTPRK-204ENST00000368210 HSPA1LP34931 641 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 PRELPP51888 382 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 GPR162Q16538 588 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 FAM47CQ5HY64 1035 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 PARP9Q8IXQ6 854 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 RMDN3Q96TC7 470 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 MTMR4Q9NYA4 1195 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 DEPDC5O75140 1603 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 POTEFA5A3E0 1075 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 GOLGA8IPA6NC78 632 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 GOLGA8JA6NMD2 632 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 SUN1O94901 812 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 POTEIP0CG38 1075 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 POTEGQ6S5H5 508 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 POTEEQ6S8J3 1075 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 EEPD1Q7L9B9 569 aa14.3□□□□□ -0.12
PTPRK-204ENST00000368210 ZCCHC17Q9NP64 241 aaKnown RBP14.3□□□□□ -0.12
PTPRK-204ENST00000368210 MTMR1Q13613 665 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 KCNB1Q14721 858 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 CCDC117Q8IWD4 279 aaPredicted RBP14.29□□□□□ -0.12
PTPRK-204ENST00000368210 GABPB2Q8TAK5 448 aaPredicted RBP14.29□□□□□ -0.12
PTPRK-204ENST00000368210 PIM2Q9P1W9 311 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 FLT1P17948 1338 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 LRRC53A6NM62 1247 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 MAN1A1P33908 653 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 PHBP35232 272 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 USP11P51784 963 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 SESN3P58005 492 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 TFAMQ00059 246 aaKnown RBP14.29□□□□□ -0.12
PTPRK-204ENST00000368210 KCNH2Q12809 1159 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 DPP9Q86TI2 863 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 DPF2Q92785 391 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 FEM1BQ9UK73 627 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 HPS5Q9UPZ3 1129 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms