RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 GCNT4Q9P109 453 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 MYH7P12883 1935 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 MAP2K7O14733 419 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 PRKAB2O43741 272 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 PSAPP07602 524 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 ZSCAN20P17040 1043 aaPredicted RBP7.89□□□□□ -1.15
VTA1-202ENST00000367630 SSR1P43307 286 aaKnown RBP7.89□□□□□ -1.15
VTA1-202ENST00000367630 ZNF131P52739 623 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 SKOR1P84550 965 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 C11orf63Q6NUN7 778 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 LRP5O75197 1615 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 K7ENM7 598 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 LCA5LO95447 670 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 DYNLL1P63167 89 aaKnown RBP7.89□□□□□ -1.15
VTA1-202ENST00000367630 ITIH4Q14624 930 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 DLGAP5Q15398 846 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 KLHL38Q2WGJ6 581 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 PHLDB3Q6NSJ2 640 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 GPKOWQ92917 476 aaPredicted RBP eCLIP7.89□□□□□ -1.15
VTA1-202ENST00000367630 CENPTQ96BT3 561 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 C2orf40Q9H1Z8 148 aa7.89□□□□□ -1.15
VTA1-202ENST00000367630 E7EVH7 732 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 CHUKO15111 745 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 EIF3HO15372 352 aaKnown RBP eCLIP7.88□□□□□ -1.15
VTA1-202ENST00000367630 PLA2G6O60733 806 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 RTN2O75298 545 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 ZRANB2O95218 330 aaKnown RBP eCLIP7.88□□□□□ -1.15
VTA1-202ENST00000367630 SERPINB2P05120 415 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 TSHRP16473 764 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 RPA1P27694 616 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 NSFP46459 744 aaKnown RBP7.88□□□□□ -1.15
VTA1-202ENST00000367630 PPP2R2AP63151 447 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 E2F4Q16254 413 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 ZNF710Q8N1W2 664 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 JDP2Q8WYK2 163 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 OLFML3Q9NRN5 406 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 ANKEF1Q9NU02 776 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 MTMR4Q9NYA4 1195 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 AIPL1Q9NZN9 384 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 SMG5Q9UPR3 1016 aaKnown RBP7.88□□□□□ -1.15
VTA1-202ENST00000367630 TNNC2P02585 160 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 PBX1P40424 430 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 RASSF7Q02833 373 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 GUCY2DQ02846 1103 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 TNFAIP2Q03169 654 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 STAT4Q14765 748 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 TBCCQ15814 346 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 DYMQ7RTS9 669 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 COL23A1Q86Y22 540 aaPredicted RBP7.88□□□□□ -1.15
VTA1-202ENST00000367630 SYNCQ9H7C4 482 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 MRPL40Q9NQ50 206 aaKnown RBP7.88□□□□□ -1.15
VTA1-202ENST00000367630 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.88□□□□□ -1.15
VTA1-202ENST00000367630 SERPINA10Q9UK55 444 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 P4HBP07237 508 aaKnown RBP7.88□□□□□ -1.15
VTA1-202ENST00000367630 KPNA2P52292 529 aaKnown RBP7.88□□□□□ -1.15
VTA1-202ENST00000367630 NEDD9Q14511 834 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 ZNF827Q17R98 1081 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 BEND6Q5SZJ8 279 aaPredicted RBP7.88□□□□□ -1.15
VTA1-202ENST00000367630 TTI2Q6NXR4 508 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 SEC31BQ9NQW1 1179 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 FHOD1Q9Y613 1164 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 USP17L3A6NCW0 530 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 USP17L4A6NCW7 530 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 IRX3P78415 501 aaPredicted RBP7.88□□□□□ -1.15
VTA1-202ENST00000367630 SH2D4BQ5SQS7 431 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 STRIP1Q5VSL9 837 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 RINT1Q6NUQ1 792 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 USP17L1Q7RTZ2 530 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 ILDR1Q86SU0 546 aaPredicted RBP7.88□□□□□ -1.15
VTA1-202ENST00000367630 SPATA4Q8NEY3 305 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 KIFC2Q96AC6 838 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.88□□□□□ -1.15
VTA1-202ENST00000367630 HOMER2Q9NSB8 354 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 THEGQ9P2T0 379 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 MAD2L2Q9UI95 211 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 CYP3A4P08684 503 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 HHATQ5VTY9 493 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 Q9H521 79 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 TFCP2L1Q9NZI6 479 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 ASIC3Q9UHC3 531 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 USP21Q9UK80 565 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 CYP3A7-CYP3A51PA0A087WV96 503 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 LRRC53A6NM62 1247 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 CYP3A7P24462 503 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 FMR1Q06787 632 aaKnown RBP eCLIP7.88□□□□□ -1.15
VTA1-202ENST00000367630 PRR16Q569H4 304 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 TRIM65Q6PJ69 517 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 HACE1Q8IYU2 909 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 CERKQ8TCT0 537 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.88□□□□□ -1.15
VTA1-202ENST00000367630 STMN2Q93045 179 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 ZNF577Q9BSK1 485 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 WDR35Q9P2L0 1181 aa7.88□□□□□ -1.15
VTA1-202ENST00000367630 RPL26L1Q9UNX3 145 aaKnown RBP7.88□□□□□ -1.15
VTA1-202ENST00000367630 ZNF335Q9H4Z2 1342 aaPredicted RBP7.87□□□□□ -1.15
VTA1-202ENST00000367630 RBAK-RBAKDNI3L0D1 243 aa7.87□□□□□ -1.15
VTA1-202ENST00000367630 O00370 1275 aa7.87□□□□□ -1.15
VTA1-202ENST00000367630 PHF2O75151 1096 aa7.87□□□□□ -1.15
VTA1-202ENST00000367630 GZMAP12544 262 aa7.87□□□□□ -1.15
VTA1-202ENST00000367630 GARSP41250 739 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms