RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 ABCB11O95342 1321 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 FAM196BA6NMK8 535 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 RSPH10B2B2RC85 870 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 CALUO43852 315 aaPredicted RBP8.9□□□□□ -0.98
CD46-208ENST00000367042 MMEP08473 750 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 RSPH10BP0C881 870 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 DR1Q01658 176 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 BIRC3Q13489 604 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 NEDD9Q14511 834 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 CYB5D1Q6P9G0 228 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 OTUD6AQ7L8S5 288 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 SYCE1Q8N0S2 351 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 ZKSCAN4Q969J2 545 aaPredicted RBP8.9□□□□□ -0.98
CD46-208ENST00000367042 ELAC2Q9BQ52 826 aaKnown RBP8.9□□□□□ -0.98
CD46-208ENST00000367042 BHMT2Q9H2M3 363 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 IKZF4Q9H2S9 585 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 LEMD3Q9Y2U8 911 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 DAAM1Q9Y4D1 1078 aa8.9□□□□□ -0.98
CD46-208ENST00000367042 SPATA31A5Q5VU36 1347 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 SPATA31A7Q8IWB4 1347 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 CAND2O75155 1236 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 CYP11B2P19099 503 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 TNFAIP3P21580 790 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 CLNS1AP54105 237 aaKnown RBP8.9□□□□□ -0.99
CD46-208ENST00000367042 GALCP54803 685 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 PSMC6P62333 389 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 GTF2IP78347 998 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 MAP2K1Q02750 393 aaPredicted RBP8.9□□□□□ -0.99
CD46-208ENST00000367042 SWT1Q5T5J6 900 aaKnown RBP8.9□□□□□ -0.99
CD46-208ENST00000367042 SLC30A10Q6XR72 485 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 C16orf86Q6ZW13 317 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 TBC1D1Q86TI0 1168 aaPredicted RBP8.9□□□□□ -0.99
CD46-208ENST00000367042 MYCT1Q8N699 235 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 ERMNQ8TAM6 284 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 SYN2Q92777 582 aaPredicted RBP8.9□□□□□ -0.99
CD46-208ENST00000367042 HAS1Q92839 578 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 FAM212AQ96EL1 285 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 CTTNBP2NLQ9P2B4 639 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 SWAP70Q9UH65 585 aa8.9□□□□□ -0.99
CD46-208ENST00000367042 THRAP3Q9Y2W1 955 aaKnown RBP8.9□□□□□ -0.99
CD46-208ENST00000367042 BCORQ6W2J9 1755 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 CCDC188H7C350 402 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 RBAK-RBAKDNI3L0D1 243 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 MED24O75448 989 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 RPL13P26373 211 aaKnown RBP8.89□□□□□ -0.99
CD46-208ENST00000367042 PON1P27169 355 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 RFC4P35249 363 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 FNTAP49354 379 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 SCNN1DP51172 638 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 SMTNP53814 917 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 KCNA1Q09470 495 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 LRRC14Q15048 493 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 SPRED3Q2MJR0 410 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 ASPRV1Q53RT3 343 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 HOOK3Q86VS8 718 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 MREGQ8N565 214 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 CCDC197Q8NCU1 140 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 PIGOQ8TEQ8 1089 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 OSBPL7Q9BZF2 842 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 RAB17Q9H0T7 212 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 JMJD4Q9H9V9 463 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 AIPL1Q9NZN9 384 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 MYH14Q7Z406 1995 aaKnown RBP8.89□□□□□ -0.99
CD46-208ENST00000367042 CACNA1SQ13698 1873 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 DOCK2Q92608 1830 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 PNMA6FA0A0J9YX94 578 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 DNM1LO00429 736 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 TRAPPC3O43617 180 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 AKAP3O75969 853 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 FAM13AO94988 1023 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 NR3C1P04150 777 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 CHN1P15882 459 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 PLCG2P16885 1265 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 TAL1P17542 331 aaPredicted RBP8.89□□□□□ -0.99
CD46-208ENST00000367042 SCTRP47872 440 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 TCP10Q12799 353 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 KNOP1Q1ED39 458 aaKnown RBP8.89□□□□□ -0.99
CD46-208ENST00000367042 NBPF9Q3BBW0 867 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 CD302Q8IX05 232 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 SYCP3Q8IZU3 236 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 ANKRD42Q8N9B4 389 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 REEP2Q9BRK0 252 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 AZI2Q9H6S1 392 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 BCAS3Q9H6U6 928 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 ACTR5Q9H9F9 607 aaPredicted RBP8.89□□□□□ -0.99
CD46-208ENST00000367042 KCNK9Q9NPC2 374 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 FAM114A2Q9NRY5 505 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 INTS9Q9NV88 658 aaKnown RBP8.89□□□□□ -0.99
CD46-208ENST00000367042 DNAJC17Q9NVM6 304 aaKnown RBP8.89□□□□□ -0.99
CD46-208ENST00000367042 MTMR4Q9NYA4 1195 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 NR2E1Q9Y466 385 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 BZW2Q9Y6E2 419 aaKnown RBP8.89□□□□□ -0.99
CD46-208ENST00000367042 COL4A1P02462 1669 aa8.89□□□□□ -0.99
CD46-208ENST00000367042 EVI5O60447 810 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 SHBGP04278 402 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 TRIM49P0CI25 452 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 TRIM49CP0CI26 452 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 FGFR4P22455 802 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 RBM5P52756 815 aaKnown RBP eCLIP8.88□□□□□ -0.994e-21■■■■□ 19.4
CD46-208ENST00000367042 FAM98CQ17RN3 349 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms