RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 USP17L17D6RBQ6 530 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 USP17L19D6RCP7 530 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 USP17L20D6RJB6 530 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 CLIC2O15247 247 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 SCP2P22307 547 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 PSMC6P62333 389 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 USP17L24Q0WX57 530 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 PICALMQ13492 652 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 USP17L6PQ6QN14 398 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 LRIG3Q6UXM1 1119 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 PARP9Q8IXQ6 854 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 N4BP2L2Q92802 583 aaPredicted RBP14.81□□□□□ -0.04
PRKN-205ENST00000366897 SELENOSQ9BQE4 189 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 QSER1Q2KHR3 1735 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 CETN3O15182 167 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 GFPT2O94808 682 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 CYP11B2P19099 503 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 RFC4P35249 363 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 KCNA1Q09470 495 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 PDIA5Q14554 519 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 AADACL2Q6P093 401 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 RUFY4Q6ZNE9 571 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 EP400NLQ6ZTU2 488 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 CCDC65Q8IXS2 484 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 FLAD1Q8NFF5 587 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 ACTRT1Q8TDG2 376 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 TBC1D31Q96DN5 1066 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 GGT7Q9UJ14 662 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 BCS1LQ9Y276 419 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 CCDC88AQ3V6T2 1871 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 F8VZ95 297 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 F8W031 263 aaPredicted RBP14.8□□□□□ -0.04
PRKN-205ENST00000366897 CTNND1O60716 968 aaKnown RBP14.8□□□□□ -0.04
PRKN-205ENST00000366897 PON1P27169 355 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 PABPC4Q13310 644 aaKnown RBP eCLIP14.8□□□□□ -0.04
PRKN-205ENST00000366897 EXOC3L4Q17RC7 722 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 CEP63Q96MT8 703 aa14.8□□□□□ -0.04
PRKN-205ENST00000366897 RSPH10B2B2RC85 870 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 TULP1O00294 542 aaPredicted RBP14.79□□□□□ -0.04
PRKN-205ENST00000366897 MED24O75448 989 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 RPSAP08865 295 aaKnown RBP14.79□□□□□ -0.04
PRKN-205ENST00000366897 RSPH10BP0C881 870 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 ZBTB48P10074 688 aaPredicted RBP14.79□□□□□ -0.04
PRKN-205ENST00000366897 SNCBQ16143 134 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 NBPF9Q3BBW0 867 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 ARSHQ5FYA8 562 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 MSL1Q68DK7 614 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 HVCN1Q96D96 273 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 PBKQ96KB5 322 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 RTFDC1Q9BY42 306 aaPredicted RBP14.79□□□□□ -0.04
PRKN-205ENST00000366897 ANKRD2Q9GZV1 360 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 RIOX1Q9H6W3 641 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 ARMCX3Q9UH62 379 aaPredicted RBP14.79□□□□□ -0.04
PRKN-205ENST00000366897 ODF2LQ9ULJ1 636 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 RTCBQ9Y3I0 505 aaKnown RBP14.79□□□□□ -0.04
PRKN-205ENST00000366897 MYH7BA7E2Y1 1941 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 ROBO3Q96MS0 1386 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 SFI1A8K8P3 1242 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 DDX3XO00571 662 aaKnown RBP eCLIP14.79□□□□□ -0.044e-14■■■■□ 23.3
PRKN-205ENST00000366897 SLCO1A2P46721 670 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 LLGL1Q15334 1064 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 SLC30A10Q6XR72 485 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 C16orf86Q6ZW13 317 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 KCTD1Q719H9 257 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 TATDN2Q93075 761 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 ERVK-5Q9HDB9 667 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 CHORDC1Q9UHD1 332 aaPredicted RBP14.79□□□□□ -0.04
PRKN-205ENST00000366897 PCDHB13Q9Y5F0 798 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 IGSF9BQ9UPX0 1349 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 SPDYE3A6NKU9 549 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 PPP1R12BO60237 982 aaPredicted RBP14.79□□□□□ -0.04
PRKN-205ENST00000366897 AKAP3O75969 853 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 H2AFZP0C0S5 128 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 TAL1P17542 331 aaPredicted RBP14.79□□□□□ -0.04
PRKN-205ENST00000366897 IFNAR2P48551 515 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 BIRC3Q13489 604 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 GKAP1Q5VSY0 366 aaPredicted RBP14.79□□□□□ -0.04
PRKN-205ENST00000366897 DPY19L2P1Q6NXN4 242 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 H2AFVQ71UI9 128 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 SFR1Q86XK3 245 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 PSMD1Q99460 953 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 PPP1R9AQ9ULJ8 1098 aa14.79□□□□□ -0.04
PRKN-205ENST00000366897 UBR3Q6ZT12 1888 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 ZNF831Q5JPB2 1677 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 BUB1BO60566 1050 aaPredicted RBP14.78□□□□□ -0.04
PRKN-205ENST00000366897 DRD4P21917 467 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 HOXD13P35453 343 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 GALCP54803 685 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 PREPLQ4J6C6 727 aaPredicted RBP14.78□□□□□ -0.04
PRKN-205ENST00000366897 RC3H1Q5TC82 1133 aaKnown RBP14.78□□□□□ -0.04
PRKN-205ENST00000366897 NT5DC3Q86UY8 548 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 GLYCTKQ8IVS8 523 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 WDR66Q8TBY9 1149 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 SGSM3Q96HU1 749 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 SETDB2Q96T68 719 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 JMJD4Q9H9V9 463 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 SEPT11Q9NVA2 429 aaKnown RBP14.78□□□□□ -0.04
PRKN-205ENST00000366897 MCM8Q9UJA3 840 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 SUFUQ9UMX1 484 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 SNX24Q9Y343 169 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms