RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 TRIP10Q15642 601 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 SYMPKQ92797 1274 aaKnown RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 EXT2Q93063 718 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 ADNPQ9H2P0 1102 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 DDX20Q9UHI6 824 aaKnown RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 DLATP10515 647 aaKnown RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 FBXL13Q8NEE6 735 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 DISC1Q9NRI5 854 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 PCDHA5Q9Y5H7 936 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 ARHGEF12Q9NZN5 1544 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 RP1L1Q8IWN7 2480 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 LCA5LO95447 670 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 GOLGA8HP0CJ92 632 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 ARHGDIAP52565 204 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 SFR1Q86XK3 245 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 CAPSLQ8WWF8 208 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 TUBB6Q9BUF5 446 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 ZBTB7BO15156 539 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 ACADSP16219 412 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 MDM2Q00987 491 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 CWF19L1Q69YN2 538 aaKnown RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 TAGAPQ8N103 731 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 RTEL1Q9NZ71 1219 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 C6orf203Q9P0P8 240 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 RASA4BC9J798 803 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 RASA4O43374 803 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 BTN2A1Q7KYR7 527 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 LRRC1Q9BTT6 524 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 RTCBQ9Y3I0 505 aaKnown RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 TTLL13PA6NNM8 815 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 PMLP29590 882 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 SLC1A4P43007 532 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 POLR2FP61218 127 aaKnown RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 CCDC84Q86UT8 332 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 TRIM39Q9HCM9 518 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 NSD2O96028 1365 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 TRIM16O95361 564 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 ARPP19P56211 112 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 GLE1Q53GS7 698 aaKnown RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 DKK3Q9UBP4 350 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 DEAF1O75398 565 aaPredicted RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 INHBAP08476 426 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 IL15P40933 162 aaPredicted RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 HIF1AQ16665 826 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 L3MBTL1Q9Y468 752 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 V9GY48 417 aaPredicted RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 ASXL3Q9C0F0 2248 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 CUL7Q14999 1698 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 OTUD4Q01804 1114 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 C10orf76Q5T2E6 689 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 PLD3Q8IV08 490 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 TYW1Q9NV66 732 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 BSDC1Q9NW68 430 aaPredicted RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 STX18Q9P2W9 335 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 TRIM10Q9UDY6 481 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 ANGEL1Q9UNK9 670 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 KDM5DQ9BY66 1539 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 SGK1O00141 431 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 BFSP1Q12934 665 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.81□□□□□ -0.522e-6■■■■■ 54.4
CDC42BPA-205ENST00000366769 PAWRQ96IZ0 340 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 BNIP3LO60238 219 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 VHLP40337 213 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 XPO6Q96QU8 1125 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 VIPAS39Q9H9C1 493 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 GAS7O60861 476 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 ACAP1Q15027 740 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 TSHZ1Q6ZSZ6 1077 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 DIS3L2Q8IYB7 885 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 GRK7Q8WTQ7 553 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 LENG1Q96BZ8 264 aaPredicted RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 MOSPD1Q9UJG1 213 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 CPSF3Q9UKF6 684 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 PPP1R2P41236 205 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 PEX5P50542 639 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 CEP78Q5JTW2 689 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 PPP1R2P3Q6NXS1 205 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 MARCH10Q8NA82 808 aaPredicted RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 MRPL1Q9BYD6 325 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 MAGEA13PA6NCF6 341 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 MT-ND3P03897 115 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 KCNA2P16389 499 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 NOL6Q9H6R4 1146 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 ZNF148Q9UQR1 794 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 ATP9AO75110 1047 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 APOA1P02647 267 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 MARK3P27448 753 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 CAPRIN1Q14444 709 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 LRRC8BQ6P9F7 803 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 POTEEQ6S8J3 1075 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 PPHLN1Q8NEY8 458 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 CNOT6LQ96LI5 555 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 LSG1Q9H089 658 aaKnown RBP11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 TNNC2P02585 160 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 HDAC4P56524 1084 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 TMPRSS15P98073 1019 aa11.81□□□□□ -0.52
CDC42BPA-205ENST00000366769 Q3C1V9 767 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms