RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 COL6A2P12110 1019 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 RPL17P18621 184 aaKnown RBP4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 HTR1BP28222 390 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 RXRBP28702 533 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 SDHAP31040 664 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 GJA4P35212 333 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MANFP55145 182 aaKnown RBP4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 GEMIN4P57678 1058 aaKnown RBP4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 DDX10Q13206 875 aaKnown RBP4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 TBX2Q13207 712 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 TMEM132BQ14DG7 1078 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 POLD3Q15054 466 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CNN3Q15417 329 aaKnown RBP4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 UVSSAQ2YD98 709 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 SGO2Q562F6 1265 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 DACT2Q5SW24 774 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 HYIQ5T013 277 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MBNL2Q5VZF2 373 aaKnown RBP4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CPZQ66K79 652 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MZT2AQ6P582 158 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 LVRNQ6Q4G3 990 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 SIRT2Q8IXJ6 389 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CLASRPQ8N2M8 674 aaKnown RBP4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 IL17REQ8NFR9 667 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 LRTOMTQ8WZ04 291 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PHKBQ93100 1093 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FAM46AQ96IP4 442 aaKnown RBP4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 SLC2A13Q96QE2 648 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CDADC1Q9BWV3 514 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 APOL5Q9BWW9 433 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 ANO3Q9BYT9 981 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 VPS11Q9H270 941 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 AKTIPQ9H8T0 292 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 RC3H2Q9HBD1 1191 aaKnown RBP4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 SLC6A20Q9NP91 592 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PDLIM7Q9NR12 457 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 SERPINB13Q9UIV8 391 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 DSEQ9UL01 958 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PADI4Q9UM07 663 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 EDARQ9UNE0 448 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 COA3Q9Y2R0 106 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PCDHGB3Q9Y5G1 929 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 ATP23Q9Y6H3 246 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 X6R8D5 127 aa4.5□□□□□ -1.69
RNU6-1249P-201ENST00000363237 RHPN2P1A8MT19 583 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 GNAT3A8MTJ3 354 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 H3BM21 787 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FOXN3O00409 490 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PIK3R2O00459 728 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 KRIT1O00522 736 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 NKRFO15226 690 aaKnown RBP eCLIP4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 EPB41L2O43491 1005 aaKnown RBP4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MAFKO60675 156 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 LEFTY1O75610 366 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 LORP23490 312 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MAP4P27816 1152 aaKnown RBP4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CHKAP35790 457 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PRIM2P49643 509 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FXR1P51114 621 aaKnown RBP eCLIP4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 BCAR1P56945 870 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 GPSM2P81274 684 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 DUSP4Q13115 394 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 SNX17Q15036 470 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 NFKBIBQ15653 356 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MUM1Q2TAK8 710 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 TUBB8Q3ZCM7 444 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 HSF5Q4G112 596 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 IZUMO3Q5VZ72 239 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 HLA-DQA1Q5Y7H0 255 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FSTL4Q6MZW2 842 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PAOXQ6QHF9 649 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 Q6ZS46 218 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MAEAQ7L5Y9 396 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 DAAM2Q86T65 1068 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 NLRP10Q86W26 655 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PPM1NQ8N819 430 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 UHMK1Q8TAS1 419 aaKnown RBP4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 SH3RF2Q8TEC5 729 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 DPF3Q92784 378 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 GCC1Q96CN9 775 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CGRRF1Q99675 332 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 LRFN3Q9BTN0 628 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FOXP3Q9BZS1 431 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 BTBD1Q9H0C5 482 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MYLK2Q9H1R3 596 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 DMRT3Q9NQL9 472 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 KMT5AQ9NQR1 393 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 STARD7Q9NQZ5 370 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 NRBP1Q9UHY1 535 aa4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FBXO2Q9UK22 296 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1249P-201ENST00000363237 LRRC10BA6NIK2 292 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PRR33A8MZF0 331 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FAM155AB1AL88 458 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 TIMM44O43615 452 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 ALX3O95076 343 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 ALDH2P05091 517 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CLEC2LP0C7M8 214 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FAM87AP0C7U9 286 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms