RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 GCFC2P16383 781 aaKnown RBP13.62□□□□□ -0.23
UBA3-202ENST00000361055 CLK2P49760 499 aaKnown RBP13.62□□□□□ -0.23
UBA3-202ENST00000361055 IRAK1P51617 712 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 MRPL12P52815 198 aaKnown RBP13.62□□□□□ -0.23
UBA3-202ENST00000361055 CORO7P57737 925 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 GFPT1Q06210 699 aaPredicted RBP13.62□□□□□ -0.23
UBA3-202ENST00000361055 COASYQ13057 564 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 LRRC41Q15345 812 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 NAB2Q15742 525 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 FAM83BQ5T0W9 1011 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 ERO1BQ86YB8 467 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 C2orf69Q8N8R5 385 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
UBA3-202ENST00000361055 MTMR8Q96EF0 704 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 TANGO6Q9C0B7 1094 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 NT5C3AQ9H0P0 336 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 ELP3Q9H9T3 547 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 PANK4Q9NVE7 773 aa13.62□□□□□ -0.23
UBA3-202ENST00000361055 KIF3CO14782 793 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 FAM26FQ5R3K3 315 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 TTBK2Q6IQ55 1244 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 IFT20Q8IY31 132 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 HAS1Q92839 578 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 CLMNQ96JQ2 1002 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 GRID2IPA4D2P6 1211 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 SPDYE5A6NIY4 337 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 WDR46O15213 610 aaKnown RBP13.61□□□□□ -0.23
UBA3-202ENST00000361055 TLR2O60603 784 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 CXCR5P32302 372 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 MATR3P43243 847 aaKnown RBP eCLIP13.61□□□□□ -0.237e-7■■■■□ 19.6
UBA3-202ENST00000361055 STAT2P52630 851 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 SLC7A5Q01650 507 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 ECM1Q16610 540 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 CCDC40Q4G0X9 1142 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 BTNL9Q6UXG8 535 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 TRIM59Q8IWR1 403 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 CCDC65Q8IXS2 484 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 ADGRF4Q8IZF3 695 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 ANKRD13CQ8N6S4 541 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 C12orf42Q96LP6 360 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 FAM107BQ9H098 131 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 JMJD4Q9H9V9 463 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 GDF3Q9NR23 364 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 EMILIN3Q9NT22 766 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 AIPL1Q9NZN9 384 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 DDX25Q9UHL0 483 aaKnown RBP13.61□□□□□ -0.23
UBA3-202ENST00000361055 PCDHA12Q9UN75 941 aa13.61□□□□□ -0.23
UBA3-202ENST00000361055 KDM3AQ9Y4C1 1321 aa13.6□□□□□ -0.23
UBA3-202ENST00000361055 NCK2O43639 380 aa13.6□□□□□ -0.23
UBA3-202ENST00000361055 PLA2G6O60733 806 aa13.6□□□□□ -0.23
UBA3-202ENST00000361055 HSF2BPO75031 334 aa13.6□□□□□ -0.23
UBA3-202ENST00000361055 SLC16A2P36021 539 aa13.6□□□□□ -0.23
UBA3-202ENST00000361055 IKQ13123 557 aaPredicted RBP13.6□□□□□ -0.23
UBA3-202ENST00000361055 C8orf74Q6P047 294 aa13.6□□□□□ -0.23
UBA3-202ENST00000361055 GLIS3Q8NEA6 775 aa13.6□□□□□ -0.23
UBA3-202ENST00000361055 RBM12Q9NTZ6 932 aaKnown RBP13.6□□□□□ -0.23
UBA3-202ENST00000361055 PCDHA2Q9Y5H9 948 aa13.6□□□□□ -0.23
UBA3-202ENST00000361055 NAP1L1P55209 391 aaKnown RBP13.59□□□□□ -0.23
UBA3-202ENST00000361055 SKOR1P84550 965 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 APBA1Q02410 837 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 SLC18A3Q16572 532 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 TDRD12Q587J7 1177 aaKnown RBP13.59□□□□□ -0.23
UBA3-202ENST00000361055 SH3D19Q5HYK7 790 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 CST9Q5W186 159 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 ZC3H3Q8IXZ2 948 aaKnown RBP13.59□□□□□ -0.23
UBA3-202ENST00000361055 CHURC1Q8WUH1 139 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 BBXQ8WY36 941 aaPredicted RBP13.59□□□□□ -0.23
UBA3-202ENST00000361055 CUL5Q93034 780 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 HINFPQ9BQA5 517 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 CAPS2Q9BXY5 557 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 NLRC4Q9NPP4 1024 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.59□□□□□ -0.23
UBA3-202ENST00000361055 PARP14Q460N5 1801 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 BTNL10A8MVZ5 291 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 BUB1O43683 1085 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 MARCH6O60337 910 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 VCAM1P19320 739 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 HMGCS2P54868 508 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 PPIL2Q13356 520 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 C10orf76Q5T2E6 689 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 MEI1Q5TIA1 1274 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 FAM160B2Q86V87 743 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 SMC1BQ8NDV3 1235 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 OPTNQ96CV9 577 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 SLC10A4Q96EP9 437 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 LSM14BQ9BX40 385 aaKnown RBP13.59□□□□□ -0.23
UBA3-202ENST00000361055 GLT8D2Q9H1C3 349 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 TMOD4Q9NZQ9 345 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 FEM1BQ9UK73 627 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 PCDHGC5Q9Y5F6 944 aa13.59□□□□□ -0.23
UBA3-202ENST00000361055 LOC285556D6RIA3 1793 aa13.58□□□□□ -0.23
UBA3-202ENST00000361055 CES2O00748 559 aa13.58□□□□□ -0.24
UBA3-202ENST00000361055 CXCL11O14625 94 aa13.58□□□□□ -0.24
UBA3-202ENST00000361055 IRF6O14896 467 aa13.58□□□□□ -0.24
UBA3-202ENST00000361055 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
UBA3-202ENST00000361055 DGKZQ13574 1117 aa13.58□□□□□ -0.24
UBA3-202ENST00000361055 SYDE2Q5VT97 1194 aa13.58□□□□□ -0.24
UBA3-202ENST00000361055 PPP4R3CPQ6ZMV5 832 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms