RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 WDR64B1ANS9 1081 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 EYA4O95677 639 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 TUBB4BP68371 445 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 SPAG1Q07617 926 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 UGCGQ16739 394 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 ZNF792Q3KQV3 632 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 PAXIP1Q6ZW49 1069 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 SYT2Q8N9I0 419 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 RDM1Q8NG50 284 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 HPS3Q969F9 1004 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 HHIPL1Q96JK4 782 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 GDAQ9Y2T3 454 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 NFASCO94856 1347 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 LOC102724159A0A0B4J2E5 919 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 NPHP3-ACAD11A0A0J9YXS1 232 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 STRNO43815 780 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 ZRANB2O95218 330 aaKnown RBP eCLIP14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 PNMA6AP0CW24 399 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 ICAM3P32942 547 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 PPP1R2P41236 205 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 PWP2Q15269 919 aaKnown RBP14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 ARSHQ5FYA8 562 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 TMEM63BQ5T3F8 832 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 ZNF746Q6NUN9 644 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 APTXQ7Z2E3 356 aaKnown RBP14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 CCDC65Q8IXS2 484 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 DNAJC19Q96DA6 116 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 WDR24Q96S15 920 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 LXNQ9BS40 222 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 CENPFP49454 3210 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 ITIH6Q6UXX5 1313 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 PPP1R3GB7ZBB8 358 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 KIF5CO60282 957 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 TLR2O60603 784 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 ARIH2O95376 493 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 CYP11B2P19099 503 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 STX17P56962 302 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 RBL2Q08999 1139 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 CRHR2Q13324 411 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 C17orf99Q6UX52 265 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 GIMAP8Q8ND71 665 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 RABGGTAQ92696 567 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 BHMT2Q9H2M3 363 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 ZSWIM4Q9H7M6 989 aa14.53□□□□□ -0.08
SQSTM1-201ENST00000360718 FANCGO15287 622 aa14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 TEX33O43247 280 aa14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 AOC2O75106 756 aa14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 UBA1P22314 1058 aaKnown RBP14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 PBX1P40424 430 aa14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 QARSP47897 775 aaKnown RBP14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 TM4SF4P48230 202 aa14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 SP4Q02446 784 aa14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 CACNB1Q02641 598 aaPredicted RBP14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 RAD51AP2Q09MP3 1159 aa14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 PSMD2Q13200 908 aa14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 GRB14Q14449 540 aa14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 FBXO16Q8IX29 292 aaPredicted RBP14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 MORC4Q8TE76 937 aa14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 GOLGA1Q92805 767 aa14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 JPH1Q9HDC5 661 aaPredicted RBP14.52□□□□□ -0.08
SQSTM1-201ENST00000360718 ZSWIM8A7E2V4 1837 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 PSMA7O14818 248 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 YY1P25490 414 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 SREBF2Q12772 1141 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 PAK1Q13153 545 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 CYFIP1Q7L576 1253 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 ABRAQ8N0Z2 381 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 SENP7Q9BQF6 1050 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 PANK4Q9NVE7 773 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 SLC9A2Q9UBY0 812 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 CTNND2Q9UQB3 1225 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 MAPK8IP1Q9UQF2 711 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 PCDHA10Q9Y5I2 948 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 ADGRG1Q9Y653 693 aa14.52□□□□□ -0.09
SQSTM1-201ENST00000360718 TMEM150BA6NC51 233 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 ASB14A6NK59 587 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 DKC1O60832 514 aaKnown RBP eCLIP14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 MFAP3LO75121 409 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 TGFB3P10600 412 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 PRCPP42785 496 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 TRIM14Q14142 442 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 TEX35Q5T0J7 233 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 KCNV1Q6PIU1 500 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 ARMCX2Q7L311 632 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 RSRC2Q7L4I2 434 aaKnown RBP14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 PLEKHH3Q7Z736 793 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 CCDC43Q96MW1 224 aaKnown RBP14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 DESI2Q9BSY9 194 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 RUSC1Q9BVN2 902 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 POLD4Q9HCU8 107 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 PDGFCQ9NRA1 345 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 LIMA1Q9UHB6 759 aaKnown RBP14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 RWDD2AQ9UIY3 292 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 ARID2Q68CP9 1835 aa14.51□□□□□ -0.09
SQSTM1-201ENST00000360718 CCDC66A2RUB6 948 aa14.5□□□□□ -0.09
SQSTM1-201ENST00000360718 LRRC10BA6NIK2 292 aa14.5□□□□□ -0.09
SQSTM1-201ENST00000360718 CTGFP29279 349 aa14.5□□□□□ -0.09
SQSTM1-201ENST00000360718 MAPK4P31152 587 aa14.5□□□□□ -0.09
SQSTM1-201ENST00000360718 PSMC5P62195 406 aa14.5□□□□□ -0.09
SQSTM1-201ENST00000360718 STK4Q13043 487 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms