RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ZNF827Q17R98 1081 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 SLC7A3Q8WY07 619 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 MAGED2Q9UNF1 606 aaPredicted RBP9.93□□□□□ -0.82
VPS13A-203ENST00000360280 FKBP3Q00688 224 aaKnown RBP9.93□□□□□ -0.82
VPS13A-203ENST00000360280 KRT72Q14CN4 511 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 FAM47EQ6ZV65 393 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 ATG3Q9NT62 314 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 KIAA1024Q9UPX6 916 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 HMGXB3Q12766 1538 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 HOXB7P09629 217 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 PPHLN1Q8NEY8 458 aaKnown RBP9.93□□□□□ -0.82
VPS13A-203ENST00000360280 FAM161BQ96MY7 647 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 BEGAINQ9BUH8 593 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 TFCP2L1Q9NZI6 479 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 CD109Q6YHK3 1445 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 MYO5CQ9NQX4 1742 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 PPP6R2O75170 966 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 CDC27P30260 824 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 PTGDRQ13258 359 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 SEPT9Q9UHD8 586 aaPredicted RBP9.93□□□□□ -0.82
VPS13A-203ENST00000360280 GOLGA8JA6NMD2 632 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 E5RI56 91 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 JAK2O60674 1132 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 DIAPH2O60879 1101 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.93□□□□□ -0.82
VPS13A-203ENST00000360280 RAD23BP54727 409 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 ZNF658Q5TYW1 1059 aaPredicted RBP9.93□□□□□ -0.82
VPS13A-203ENST00000360280 BTN2A2Q8WVV5 523 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 PRAG1Q86YV5 1406 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 CYP26B1Q9NR63 512 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.93□□□□□ -0.82
VPS13A-203ENST00000360280 CSADQ9Y600 493 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 SH3TC1Q8TE82 1336 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 POTEAQ6S8J7 498 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 PIK3R5Q8WYR1 880 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 POLR3EQ9NVU0 708 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 TP53BP2Q13625 1128 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 P2RX5Q93086 422 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 USP40Q9NVE5 1235 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 ADAM21Q9UKJ8 722 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 MIF4GDA9UHW6 222 aaKnown RBP9.92□□□□□ -0.82
VPS13A-203ENST00000360280 hCG_1984214I3L0E3 225 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 PDE8AO60658 829 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 VCPP55072 806 aaKnown RBP9.92□□□□□ -0.82
VPS13A-203ENST00000360280 GOLGA8FQ08AF8 430 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 GOLGA8DPQ0D2H9 430 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 ZNF713Q8N859 430 aaPredicted RBP9.92□□□□□ -0.82
VPS13A-203ENST00000360280 ECT2Q9H8V3 914 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 SENP1Q9P0U3 644 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 SEC24BO95487 1268 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 ELMSAN1Q6PJG2 1045 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 EXT2Q93063 718 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 ULK4Q96C45 1275 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 AGBL1Q96MI9 1066 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 CUL3Q13618 768 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 KIAA1755Q5JYT7 1200 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 FAM133AQ8N9E0 248 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 TTC13Q8NBP0 860 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 ACCSQ96QU6 501 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 FOXP1Q9H334 677 aaPredicted RBP9.92□□□□□ -0.82
VPS13A-203ENST00000360280 SUGCTQ9HAC7 445 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 PARVGQ9HBI0 331 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 ETNK1Q9HBU6 452 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 PPP2R2AP63151 447 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 NSUN2Q08J23 767 aaKnown RBP eCLIP9.92□□□□□ -0.82
VPS13A-203ENST00000360280 TRADDQ15628 312 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 BTNL9Q6UXG8 535 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 ANKRD13CQ8N6S4 541 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 FLCNQ8NFG4 579 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 ARIH2O95376 493 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 CEP95Q96GE4 821 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 PCDHA7Q9UN72 937 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 SOWAHDA6NJG2 315 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 SLC7A5Q01650 507 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 UBE3AQ05086 875 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 LRRC8EQ6NSJ5 796 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 KIRREL3Q8IZU9 778 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 SPATA17Q96L03 361 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 GMNCA6NCL1 334 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 KRT27Q7Z3Y8 459 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 TNIP2Q8NFZ5 429 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 GCNAQ96QF7 691 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 ZFYVE1Q9HBF4 777 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 MYH11P35749 1972 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 VAMP4O75379 141 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 FTCDO95954 541 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 DMRT2Q9Y5R5 561 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 LRRC4Q9HBW1 653 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 ADGRF5Q8IZF2 1346 aa9.92□□□□□ -0.82
VPS13A-203ENST00000360280 ANGPT2O15123 496 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 CTIFO43310 598 aaKnown RBP9.91□□□□□ -0.82
VPS13A-203ENST00000360280 SOX6P35712 828 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 ZBED6P86452 979 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 LRRC63Q05C16 580 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 THAP9Q9H5L6 903 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 GOLGA8SH3BPF8 625 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 GNPATO15228 680 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 SLC44A4Q53GD3 710 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 HINFPQ9BQA5 517 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 FAM167BQ9BTA0 163 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms