RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 WDR62O43379 1518 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 SPAG7O75391 227 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 ESRRBO95718 433 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 MYBL1P10243 752 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 DYNLT1P63172 113 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 SLC39A14Q15043 492 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 TMCO4Q5TGY1 634 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 APOA5Q6Q788 366 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 SPICE1Q8N0Z3 855 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 BEST2Q8NFU1 509 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 SLC10A4Q96EP9 437 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 KRT8P05787 483 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 ZNF699Q32M78 642 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 TRIM72Q6ZMU5 477 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 A1BGP04217 495 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 SLFN14P0C7P3 912 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 ATP1A2P50993 1020 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 SCRN1Q12765 414 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 WDR75Q8IWA0 830 aaKnown RBP10.35□□□□□ -0.75
CUX1-203ENST00000360264 MOCS3O95396 460 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 SERPINB2P05120 415 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 PSMA3P25788 255 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 PHKA1P46020 1223 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 MFSD14CQ5VZR4 134 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 CIAPIN1Q6FI81 312 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 SUFUQ9UMX1 484 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 CACNA1CQ13936 2221 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 ZMYM1Q5SVZ6 1142 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 COA1Q9GZY4 146 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 ANP32DO95626 131 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 RARS2Q5T160 578 aaKnown RBP10.35□□□□□ -0.75
CUX1-203ENST00000360264 MCPH1Q8NEM0 835 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 KHDRBS2Q5VWX1 349 aaKnown RBP10.35□□□□□ -0.75
CUX1-203ENST00000360264 FAM133AQ8N9E0 248 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 SP110Q9HB58 689 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 DENND3A2RUS2 1198 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 STK25O00506 426 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 ZBED6P86452 979 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 CDC42EP1Q00587 391 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 HP1BP3Q5SSJ5 553 aaPredicted RBP10.35□□□□□ -0.75
CUX1-203ENST00000360264 MPP6Q9NZW5 540 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 L3MBTL1Q9Y468 752 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 E9PMD0 336 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 MAML1Q92585 1016 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 PIK3R2O00459 728 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.35□□□□□ -0.75
CUX1-203ENST00000360264 TAP1Q03518 808 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 ZNF667Q5HYK9 610 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 TTC23LQ6PF05 361 aa10.35□□□□□ -0.75
CUX1-203ENST00000360264 DCTN3O75935 186 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 SEMA3FQ13275 785 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 CATSPER1Q8NEC5 780 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.34□□□□□ -0.75
CUX1-203ENST00000360264 SH3KBP1Q96B97 665 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 BSDC1Q9NW68 430 aaPredicted RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 ATP8A1Q9Y2Q0 1164 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 PCDHA13Q9Y5I0 950 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 K7ERI5 159 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 PHKA2P46019 1235 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 TMED2Q15363 201 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 Q3C1V9 767 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 CLEC4GQ6UXB4 293 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 PPP1R2P1Q96PQ5 205 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 GREM2Q9H772 168 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 CHCHD3Q9NX63 227 aaKnown RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 KLHL8Q9P2G9 620 aaPredicted RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 ZFYVE16Q7Z3T8 1539 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 GFPT2O94808 682 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 LIFRP42702 1097 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 PLTPP55058 493 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 MXD4Q14582 209 aaPredicted RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 ITPRIPL1Q6GPH6 555 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 TAB3Q8N5C8 712 aaPredicted RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 DPH5Q9H2P9 285 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 PTPRTO14522 1441 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 KPNA7A9QM74 516 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 E5RI56 91 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 CTNND1O60716 968 aaKnown RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 MTERF2Q49AM1 385 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 ERICH1Q86X53 443 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 NDEL1Q9GZM8 345 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 TPX2Q9ULW0 747 aaKnown RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 MIF4GDA9UHW6 222 aaKnown RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 USP44Q9H0E7 712 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 PPP1R12AO14974 1030 aaPredicted RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 KDM1AO60341 852 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 COA7Q96BR5 231 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 ASIC4Q96FT7 647 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 FTOQ9C0B1 505 aaKnown RBP eCLIP10.34□□□□□ -0.75
CUX1-203ENST00000360264 YY1AP1Q9H869 796 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 SELENONQ9NZV5 590 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 ARHGEF9O43307 516 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 EIF4A3P38919 411 aaKnown RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 EMBQ6PCB8 327 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 SLC26A7Q8TE54 656 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 RUBCNQ92622 972 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 KLHL29Q96CT2 875 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 APOBEC2Q9Y235 224 aaKnown RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 AP3B1O00203 1094 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 PPP1R18Q6NYC8 613 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms