RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PPP6R3Q5H9R7 873 aaPredicted RBP19.71■□□□□ 0.75
SHANK1-202ENST00000359082 ABCB6Q9NP58 842 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 ZBTB1Q9Y2K1 713 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 FGGP02679 453 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 MYL1P05976 194 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 CCNE1P24864 410 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 CAPRIN1Q14444 709 aaKnown RBP19.71■□□□□ 0.75
SHANK1-202ENST00000359082 TAF1BQ53T94 588 aaPredicted RBP19.71■□□□□ 0.75
SHANK1-202ENST00000359082 C6orf118Q5T5N4 469 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 NRBF2Q96F24 287 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 ZSWIM5Q9P217 1185 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 ALS2CLQ60I27 953 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 STAP2Q9UGK3 403 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 TEKT2Q9UIF3 430 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 MID2Q9UJV3 735 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 PNMA6FA0A0J9YX94 578 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 SEPT2Q15019 361 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 SLC27A3Q5K4L6 730 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 ZBTB18Q99592 522 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 SNX2O60749 519 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 TADA3O75528 432 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 KCNA1Q09470 495 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 UPF3AQ9H1J1 476 aaKnown RBP19.7■□□□□ 0.74
SHANK1-202ENST00000359082 FBXW4P57775 412 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 ZBTB17Q13105 803 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 ARHGEF5Q12774 1597 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 TJP3O95049 919 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 ADCY2Q08462 1091 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 TSR3Q9UJK0 312 aaKnown RBP19.7■□□□□ 0.74
SHANK1-202ENST00000359082 GUCY2CP25092 1073 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 CIITAP33076 1130 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 PPARGP37231 505 aaPredicted RBP19.7■□□□□ 0.74
SHANK1-202ENST00000359082 ARHGEF6Q15052 776 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 FAM196AQ6ZSG2 479 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 PIGOQ8TEQ8 1089 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 TTC25Q96NG3 672 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 AIFM3Q96NN9 605 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 RNF14Q9UBS8 474 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 ARHGEF37A1IGU5 675 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 NKX1-1Q15270 411 aaPredicted RBP19.7■□□□□ 0.74
SHANK1-202ENST00000359082 IFT43Q96FT9 208 aa19.7■□□□□ 0.74
SHANK1-202ENST00000359082 PALMO75781 387 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 PLEKHA8P1O95397 391 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 TRIML2Q8N7C3 387 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 PRPF38AQ8NAV1 312 aaKnown RBP19.69■□□□□ 0.74
SHANK1-202ENST00000359082 PDCD6IPQ8WUM4 868 aaKnown RBP19.69■□□□□ 0.74
SHANK1-202ENST00000359082 ELAC2Q9BQ52 826 aaKnown RBP19.69■□□□□ 0.74
SHANK1-202ENST00000359082 KLC2Q9H0B6 622 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 SMYD3Q9H7B4 428 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 GTSE1Q9NYZ3 720 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 SUGT1Q9Y2Z0 365 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 SYNDIG1LA6NDD5 238 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 TMPRSS15P98073 1019 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 OSBP2Q969R2 916 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 HEMGNQ9BXL5 484 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 ANP32DO95626 131 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 CDK8P49336 464 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 FAM182BQ5T319 152 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 PANX2Q96RD6 677 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 NGRNQ9NPE2 291 aaKnown RBP19.69■□□□□ 0.74
SHANK1-202ENST00000359082 PI4KBQ9UBF8 816 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 CLCN6P51797 869 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 NUGGCQ68CJ6 796 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 SCINQ9Y6U3 715 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 K7ERI5 159 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 COPEO14579 308 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 SKIP12755 728 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 KRT31Q15323 416 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 TBC1D1Q86TI0 1168 aaPredicted RBP19.69■□□□□ 0.74
SHANK1-202ENST00000359082 THNSL1Q8IYQ7 743 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 PDIK1LQ8N165 341 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 FSD1LQ9BXM9 530 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 ZNF341Q9BYN7 854 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 SLITRK6Q9H5Y7 841 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 ACTR5Q9H9F9 607 aaPredicted RBP19.69■□□□□ 0.74
SHANK1-202ENST00000359082 ERBB4Q15303 1308 aa19.69■□□□□ 0.74
SHANK1-202ENST00000359082 ENOX1Q8TC92 643 aaKnown RBP19.68■□□□□ 0.74
SHANK1-202ENST00000359082 TRPV6Q9H1D0 765 aa19.68■□□□□ 0.74
SHANK1-202ENST00000359082 LARGE1O95461 756 aa19.68■□□□□ 0.74
SHANK1-202ENST00000359082 CASP8Q14790 479 aa19.68■□□□□ 0.74
SHANK1-202ENST00000359082 SYT2Q8N9I0 419 aaPredicted RBP19.68■□□□□ 0.74
SHANK1-202ENST00000359082 L3MBTL1Q9Y468 752 aa19.68■□□□□ 0.74
SHANK1-202ENST00000359082 MCF2P10911 925 aa19.68■□□□□ 0.74
SHANK1-202ENST00000359082 QTRT2Q9H974 415 aaKnown RBP19.68■□□□□ 0.74
SHANK1-202ENST00000359082 PIH1D3Q9NQM4 214 aaKnown RBP19.68■□□□□ 0.74
SHANK1-202ENST00000359082 KLHL8Q9P2G9 620 aaPredicted RBP19.68■□□□□ 0.74
SHANK1-202ENST00000359082 TMEM247A6NEH6 219 aa19.68■□□□□ 0.74
SHANK1-202ENST00000359082 F8W8V4 182 aa19.68■□□□□ 0.74
SHANK1-202ENST00000359082 SPAG7O75391 227 aa19.68■□□□□ 0.74
SHANK1-202ENST00000359082 CD2BP2O95400 341 aaKnown RBP19.68■□□□□ 0.74
SHANK1-202ENST00000359082 TOGARAM2Q6ZUX3 1019 aa19.68■□□□□ 0.74
SHANK1-202ENST00000359082 RASSF3Q86WH2 238 aa19.68■□□□□ 0.74
SHANK1-202ENST00000359082 EDEM3Q9BZQ6 932 aa19.68■□□□□ 0.74
SHANK1-202ENST00000359082 DHX36Q9H2U1 1008 aaKnown RBP19.68■□□□□ 0.74
SHANK1-202ENST00000359082 EIF3BP55884 814 aaKnown RBP19.68■□□□□ 0.74
SHANK1-202ENST00000359082 THEM5Q8N1Q8 247 aa19.68■□□□□ 0.74
SHANK1-202ENST00000359082 ANO4Q32M45 955 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 SLC4A7Q9Y6M7 1214 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 SRGAP2O75044 1071 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 CUL1Q13616 776 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms