RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 RASGRF2O14827 1237 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 CLIC2O15247 247 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 SRGAP2O75044 1071 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 SNUPNO95149 360 aaKnown RBP10.46□□□□□ -0.74
CHD3-202ENST00000358181 RXRBP28702 533 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 GUCA1AP43080 201 aaPredicted RBP10.46□□□□□ -0.74
CHD3-202ENST00000358181 IQCDQ96DY2 449 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 RUBCNLQ9H714 662 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 PRG3Q9Y2Y8 225 aaPredicted RBP10.46□□□□□ -0.74
CHD3-202ENST00000358181 COPG1Q9Y678 874 aaKnown RBP10.46□□□□□ -0.74
CHD3-202ENST00000358181 PPEF1O14829 653 aaPredicted RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 KLHL18O94889 574 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 CATSPER4Q7RTX7 472 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 DIS3L2Q8IYB7 885 aaKnown RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 GALNT8Q9NY28 637 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 FBXL21Q9UKT6 434 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 PCDHA12Q9UN75 941 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 USP17L12C9JPN9 530 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 USP17L21D6R901 530 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 ADORA1P30542 326 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 AKT1P31749 480 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 KPNA2P52292 529 aaKnown RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 ALDH6A1Q02252 535 aaKnown RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 SUPT20HL1Q3ZLR7 823 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 RASSF3Q86WH2 238 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 MFN1Q8IWA4 741 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 ZNF614Q8N883 585 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 EXOC4Q96A65 974 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 PAIP2BQ9ULR5 123 aaKnown RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 DTNAQ9Y4J8 743 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 ALDH1A2O94788 518 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 HSPA4LO95757 839 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 NUMBP49757 651 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 PPP6R3Q5H9R7 873 aaPredicted RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 SLC10A5Q5PT55 438 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 ARMCX2Q7L311 632 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 BHMTQ93088 406 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 CEP170P1Q96L14 293 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 PUS3Q9BZE2 481 aaKnown RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 MAP3K15Q6ZN16 1313 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 GOLGA8IPA6NC78 632 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 GOLGA8JA6NMD2 632 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 PPP1R2P41236 205 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 BTDP43251 543 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 ERFEQ4G0M1 354 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 FAM133BQ5BKY9 247 aaKnown RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 TCP11X2Q5H9J9 407 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 CEP70Q8NHQ1 597 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 SLC7A3Q8WY07 619 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 LPIN2Q92539 896 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 RMDN1Q96DB5 314 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 KLHL25Q9H0H3 589 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 KCNH4Q9UQ05 1017 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 BIVM-ERCC5R4GMW8 1640 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 ADCY3O60266 1144 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 MFAP3P55082 362 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 TRIM69Q86WT6 500 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 EXOC8Q8IYI6 725 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 TDRD7Q8NHU6 1098 aaKnown RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 ZC3H15Q8WU90 426 aaKnown RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 DHX38Q92620 1227 aaKnown RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 APPBP2Q92624 585 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 MYCBPQ99417 103 aaPredicted RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 GINM1Q9NU53 330 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 THEGQ9P2T0 379 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 ABCC10Q5T3U5 1492 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 WDR17Q8IZU2 1322 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 NEURL1BA8MQ27 555 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 PROSER3Q2NL68 480 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 IPCEF1Q8WWN9 437 aaPredicted RBP10.45□□□□□ -0.74
CHD3-202ENST00000358181 KCNG1Q9UIX4 513 aa10.45□□□□□ -0.74
CHD3-202ENST00000358181 RASSF10A6NK89 507 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 MED7O43513 233 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 SCG2P13521 617 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 ADKP55263 362 aaKnown RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 NR5A1Q13285 461 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 C10orf76Q5T2E6 689 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 POTEDQ86YR6 584 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 OR9Q1Q8NGQ5 310 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 ZSCAN18Q8TBC5 510 aaPredicted RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 H2AFY2Q9P0M6 372 aaPredicted RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 ARHGAP26Q9UNA1 814 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 SPTLC1O15269 473 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 ALDH1A1P00352 501 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 GRIK1P39086 918 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 GNGT1P63211 74 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 GRAMD4Q6IC98 578 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 AGR3Q8TD06 166 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 FAF2Q96CS3 445 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 DDX28Q9NUL7 540 aaKnown RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 PACSIN2Q9UNF0 486 aaPredicted RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 ARHGEF37A1IGU5 675 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 SEC24DO94855 1032 aaPredicted RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 SLC16A2P36021 539 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 NUP62P37198 522 aaPredicted RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 ERAP2Q6P179 960 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 SLFN12Q8IYM2 578 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 MYOCDQ8IZQ8 938 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 TSEN34Q9BSV6 310 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms