RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 PPP1R3GB7ZBB8 358 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ATP1A2P50993 1020 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 PRKAA2P54646 552 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 LRRC43Q8N309 656 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SRBD1Q8N5C6 995 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CEP95Q96GE4 821 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 WDR11Q9BZH6 1224 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SMIM31A0A1B0GVY4 71 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ARID5BQ14865 1188 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 MOXD1Q6UVY6 613 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ARHGAP22Q7Z5H3 698 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SCYL3Q8IZE3 742 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 LARGE2Q8N3Y3 721 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 USP38Q8NB14 1042 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 OSBP2Q969R2 916 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 LRRC2Q9BYS8 371 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 IQANK1A0A1B0GTG1 560 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 TBX3O15119 743 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 MAP7D3Q8IWC1 876 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CDAN1Q8IWY9 1227 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 LSM1O15116 133 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 RASSF9O75901 435 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SPATA21Q7Z572 469 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 MRPL44Q9H9J2 332 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ANKFY1Q9P2R3 1169 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 MYH15Q9Y2K3 1946 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 H2AFYO75367 372 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SYF2O95926 243 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 GRM1Q13255 1194 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 WDR75Q8IWA0 830 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 STKLD1Q8NE28 680 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 DNAJC9Q8WXX5 260 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CSRNP1Q96S65 589 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SPAG7O75391 227 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CC2D2BQ6DHV5 1058 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 PDZD4Q76G19 769 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 PRUNE1Q86TP1 453 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CREG2Q8IUH2 290 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 DAGLBQ8NCG7 672 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 PIK3R5Q8WYR1 880 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ZC3H6P61129 1189 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 AMPD2Q01433 879 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 IRGCQ6NXR0 463 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 OTUD6AQ7L8S5 288 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CDKL2Q92772 493 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 VCPIP1Q96JH7 1222 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 RILPQ96NA2 401 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 LY9Q9HBG7 655 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF212Q9UDV6 495 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 POLR2BP30876 1174 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 TTI2Q6NXR4 508 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 PIK3AP1Q6ZUJ8 805 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SETD3Q86TU7 594 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 MTRQ99707 1265 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 TSPYL2Q9H2G4 693 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 BARHL2Q9NY43 387 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 PCDHGC5Q9Y5F6 944 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 GMEB1Q9Y692 573 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 PPM1FP49593 454 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 RBM5P52756 815 aaKnown RBP eCLIP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 OCRLQ01968 901 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 AAGABQ6PD74 315 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 EPSTI1Q96J88 318 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ASIC3Q9UHC3 531 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 PCYOX1Q9UHG3 505 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SPDYE3A6NKU9 549 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 TSHRP16473 764 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 NFATC2IPQ8NCF5 419 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 PIGOQ8TEQ8 1089 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 DGCR14Q96DF8 476 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 APOBEC2Q9Y235 224 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 TNKSO95271 1327 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 GOLGA8MH3BSY2 632 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 OPHN1O60890 802 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 COG7P83436 770 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 DIXDC1Q155Q3 683 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PFKFB3Q16875 520 aaPredicted RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 TMC4Q7Z404 712 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PHKBQ93100 1093 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ARPP21Q9UBL0 812 aaPredicted RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 NOVA2Q9UNW9 492 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 RTN3O95197 1032 aaPredicted RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CCDC80Q76M96 950 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 SH3RF1Q7Z6J0 888 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 DDX54Q8TDD1 881 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ZBTB9Q96C00 473 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 OSBPL1AQ9BXW6 950 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 EBF2Q9HAK2 575 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 FRMD3A2A2Y4 597 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 GOLGA8TH3BQL2 631 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 GOLGA8HP0CJ92 632 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ESRRAP11474 423 aaPredicted RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ITGB3BPQ13352 177 aaPredicted RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 SLFN12LQ6IEE8 588 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ATP11CQ8NB49 1132 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 LARP4BQ92615 738 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 FAF1Q9UNN5 650 aaPredicted RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 STARD13Q9Y3M8 1113 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 IQCA1LA6NCM1 817 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 INHBAP08476 426 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms