RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 ASPRV1Q53RT3 343 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 ZNF772Q68DY9 489 aaPredicted RBP13.75□□□□□ -0.21
SMC4-202ENST00000357388 SRLQ86TD4 932 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 NOP9Q86U38 636 aaKnown RBP13.75□□□□□ -0.21
SMC4-202ENST00000357388 FAM161BQ96MY7 647 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 APOL6Q9BWW8 343 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 WDR11Q9BZH6 1224 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 THRAP3Q9Y2W1 955 aaKnown RBP13.75□□□□□ -0.21
SMC4-202ENST00000357388 XDHP47989 1333 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 FOXP2O15409 715 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
SMC4-202ENST00000357388 EFTUD2Q15029 972 aaKnown RBP eCLIP13.75□□□□□ -0.211e-7■■□□□ 13.4
SMC4-202ENST00000357388 PATL1Q86TB9 770 aaKnown RBP13.75□□□□□ -0.21
SMC4-202ENST00000357388 BTBD6Q96KE9 485 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 PCDHA1Q9Y5I3 950 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 PLEKHG3A1L390 1219 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 HNRNPDLO14979 420 aaKnown RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 HNRNPRO43390 633 aaKnown RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 PDE6AP16499 860 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 PMS1P54277 932 aaKnown RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 LRRC47Q8N1G4 583 aaKnown RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 AGGF1Q8N302 714 aaeCLIP13.74□□□□□ -0.212e-85■■■■■ 286.7
SMC4-202ENST00000357388 ZBTB38Q8NAP3 1195 aaPredicted RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 RBM41Q96IZ5 413 aaKnown RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 GCOM2Q9BZD3 368 aaPredicted RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 SLC38A10Q9HBR0 1119 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 USP19O94966 1318 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 BTBD18B2RXH4 712 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 IL10P22301 178 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 ANXA13P27216 316 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 IL13P35225 146 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 SCNN1DP51172 638 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 DOK7Q18PE1 504 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 TTC17Q96AE7 1141 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 CCDC127Q96BQ5 260 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 KIF17Q9P2E2 1029 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 SEPT9Q9UHD8 586 aaPredicted RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 CDV3Q9UKY7 258 aaKnown RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 FIS1Q9Y3D6 152 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 ABCC4O15439 1325 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 FAM187AA6NFU0 413 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 PCCAP05165 728 aaPredicted RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 GSPT1P15170 499 aaKnown RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 FAM133AQ8N9E0 248 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 KCNV2Q8TDN2 545 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 LGR6Q9HBX8 967 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 NEURL1BA8MQ27 555 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 MEFVO15553 781 aaPredicted RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 PMS2P54278 862 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 MRPS35P82673 323 aaKnown RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 HDLBPQ00341 1268 aaKnown RBP13.74□□□□□ -0.21
SMC4-202ENST00000357388 C1orf228Q6PIY5 440 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 HIPK4Q8NE63 616 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 CARMIL3Q8ND23 1372 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 ZBED1O96006 694 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 CXCR5P32302 372 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 BPIFA3Q9BQP9 254 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 CCDC90BQ9GZT6 254 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 SENP1Q9P0U3 644 aa13.74□□□□□ -0.21
SMC4-202ENST00000357388 ARHGEF12Q9NZN5 1544 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 PNMA6EA0A0J9YXQ4 647 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 PRPSAP2O60256 369 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 SURF1Q15526 300 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 CC2D2BQ6DHV5 1058 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 MB21D1Q8N884 522 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 SSH3Q8TE77 659 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 GJA10Q969M2 543 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 VIPAS39Q9H9C1 493 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 SAYSD1Q9NPB0 183 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 BLOC1S6Q9UL45 172 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 TNKSO95271 1327 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 PPEF1O14829 653 aaPredicted RBP13.73□□□□□ -0.21
SMC4-202ENST00000357388 ACSL3O95573 720 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 MAGOHP61326 146 aaKnown RBP13.73□□□□□ -0.21
SMC4-202ENST00000357388 SLC7A5Q01650 507 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 KIRREL3Q8IZU9 778 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 CCNYQ8ND76 341 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 RMDN2Q96LZ7 410 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 TGS1Q96RS0 853 aaKnown RBP13.73□□□□□ -0.21
SMC4-202ENST00000357388 SMYD3Q9H7B4 428 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 MRGBPQ9NV56 204 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 PCDHA4Q9UN74 947 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 CCND1P24385 295 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 S100A5P33763 92 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 COPS2P61201 443 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 SCRN1Q12765 414 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 DAB2IPQ5VWQ8 1189 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 FAM149B1Q96BN6 582 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 CNBD2Q96M20 576 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 SYNJ2BP-COX16A0A087WUM0 186 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 hCG_1642624A0A1W2PR95 340 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 INO80B-WBP1J3KQ70 363 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 HLA-DPA1P20036 260 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 IREB2P48200 963 aaKnown RBP13.73□□□□□ -0.21
SMC4-202ENST00000357388 DNAL1Q4LDG9 190 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 FAM196AQ6ZSG2 479 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 ADCK1Q86TW2 530 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 HORMAD1Q86X24 394 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 INO80BQ9C086 356 aaPredicted RBP13.73□□□□□ -0.21
SMC4-202ENST00000357388 UBN1Q9NPG3 1134 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms