RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 TTC17Q96AE7 1141 aa7.31□□□□□ -1.24
NF1-201ENST00000356175 DDX50Q9BQ39 737 aaKnown RBP7.31□□□□□ -1.24
NF1-201ENST00000356175 KIFC3Q9BVG8 833 aa7.31□□□□□ -1.24
NF1-201ENST00000356175 ARHGEF10LQ9HCE6 1279 aa7.31□□□□□ -1.24
NF1-201ENST00000356175 GLE1Q53GS7 698 aaKnown RBP7.31□□□□□ -1.24
NF1-201ENST00000356175 MYCBPAPQ8TBZ2 947 aa7.31□□□□□ -1.24
NF1-201ENST00000356175 UBN1Q9NPG3 1134 aa7.31□□□□□ -1.24
NF1-201ENST00000356175 PHF8Q9UPP1 1060 aa7.31□□□□□ -1.24
NF1-201ENST00000356175 PSMD11O00231 422 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 ZNF213O14771 459 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 B3GALNT1O75752 331 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 POU5F1Q01860 360 aaKnown RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 RARS2Q5T160 578 aaKnown RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 PAIP1Q9H074 479 aaKnown RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 GNGT2O14610 69 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 USP12O75317 370 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 UBOX5O94941 541 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 PI4KAP42356 2102 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 CCT3P49368 545 aaKnown RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 ALDH5A1P51649 535 aaPredicted RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 NELFCDQ8IXH7 590 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 NCOA3Q9Y6Q9 1424 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 PASKQ96RG2 1323 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 GSTA1P08263 222 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 GSTA2P09210 222 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 RABGAP1LQ5R372 815 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 COG1Q8WTW3 980 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 FAM129AQ9BZQ8 928 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 ATRXP46100 2492 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 GNAT3A8MTJ3 354 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 PALMO75781 387 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 TCN1P20061 433 aaPredicted RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 GPR141Q7Z602 305 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 KIFC2Q96AC6 838 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 MRPL44Q9H9J2 332 aaKnown RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 SYBUQ9NX95 663 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 HAO1Q9UJM8 370 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 AKAP11Q9UKA4 1901 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 SCAMP1O15126 338 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 MFAP3LO75121 409 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 LETM2Q2VYF4 491 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 TMEM63BQ5T3F8 832 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 SPICE1Q8N0Z3 855 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 EDEM3Q9BZQ6 932 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 LNPEPQ9UIQ6 1025 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 RBM47A0AV96 593 aaKnown RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 CA4P22748 312 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 CCZ1BP86790 482 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 CCZ1P86791 482 aaPredicted RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 KCTD2Q14681 263 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 CCDC142Q17RM4 750 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 DDI2Q5TDH0 399 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 E4F1Q66K89 784 aaPredicted RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 ZNF786Q8N393 782 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 DIS3LQ8TF46 1054 aaKnown RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 SLC39A3Q9BRY0 314 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 TRIM8Q9BZR9 551 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 SAMSN1Q9NSI8 373 aaKnown RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 NR1D2Q14995 579 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 GOLPH3LQ9H4A5 285 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 FAM153AQ9UHL3 310 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 WBP11Q9Y2W2 641 aaKnown RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 PCDHA13Q9Y5I0 950 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 SPDYE5A6NIY4 337 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 STX10O60499 249 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 PPP1R37O75864 691 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 A1BGP04217 495 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 AMPD3Q01432 767 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 ITGADQ13349 1161 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 KRT24Q2M2I5 525 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 ADCK5Q3MIX3 580 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 C10orf76Q5T2E6 689 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 THTPAQ9BU02 230 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 TTLL3Q9Y4R7 772 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 JAK1P23458 1154 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 COPB1P53618 953 aaKnown RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 NDNQ99608 321 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 HPS4Q9NQG7 708 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 IDH3BO43837 385 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 DEAF1O75398 565 aaPredicted RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 PPIDQ08752 370 aaKnown RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 TTBK2Q6IQ55 1244 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 CLEC4GQ6UXB4 293 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 ANKRD35Q8N283 1001 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 UBE2OQ9C0C9 1292 aaKnown RBP7.3□□□□□ -1.24
NF1-201ENST00000356175 SNX25Q9H3E2 840 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 SPEF1Q9Y4P9 236 aa7.3□□□□□ -1.24
NF1-201ENST00000356175 COPS2P61201 443 aa7.29□□□□□ -1.24
NF1-201ENST00000356175 USP46P62068 366 aa7.29□□□□□ -1.24
NF1-201ENST00000356175 BIRC3Q13489 604 aa7.29□□□□□ -1.24
NF1-201ENST00000356175 ALDH1L2Q3SY69 923 aa7.29□□□□□ -1.24
NF1-201ENST00000356175 LRRC1Q9BTT6 524 aa7.29□□□□□ -1.24
NF1-201ENST00000356175 DIABLOQ9NR28 239 aa7.29□□□□□ -1.24
NF1-201ENST00000356175 PMF1-BGLAPU3KQ54 211 aa7.29□□□□□ -1.24
NF1-201ENST00000356175 CCRL2O00421 344 aa7.29□□□□□ -1.24
NF1-201ENST00000356175 BAIAP3O94812 1187 aa7.29□□□□□ -1.24
NF1-201ENST00000356175 CALM1P0DP23 149 aa7.29□□□□□ -1.24
NF1-201ENST00000356175 CALM2P0DP24 149 aa7.29□□□□□ -1.24
NF1-201ENST00000356175 CALM3P0DP25 149 aa7.29□□□□□ -1.24
NF1-201ENST00000356175 IZUMO2Q6UXV1 221 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms