RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 NDUFA10O95299 355 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 TRIM49P0CI25 452 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 TRIM49CP0CI26 452 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 NCBP1Q09161 790 aaKnown RBP19.4■□□□□ 0.7
NPAS3-202ENST00000356141 PTPROQ16827 1216 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 DAW1Q8N136 415 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 NHEJ1Q9H9Q4 299 aaPredicted RBP19.4■□□□□ 0.7
NPAS3-202ENST00000356141 CETN3O15182 167 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 NR3C1P04150 777 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 DNA2P51530 1060 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 SEMA3FQ13275 785 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 REPS2Q8NFH8 660 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 ZNF526Q8TF50 670 aaPredicted RBP19.4■□□□□ 0.7
NPAS3-202ENST00000356141 TUFT1Q9NNX1 390 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 CYP39A1Q9NYL5 469 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 GABBR1Q9UBS5 961 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 PUF60Q9UHX1 559 aaKnown RBP19.4■□□□□ 0.7
NPAS3-202ENST00000356141 SIK3Q9Y2K2 1263 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 LRRN2O75325 713 aa19.39■□□□□ 0.7
NPAS3-202ENST00000356141 YWHABP31946 246 aaKnown RBP19.39■□□□□ 0.7
NPAS3-202ENST00000356141 KCNH2Q12809 1159 aa19.39■□□□□ 0.7
NPAS3-202ENST00000356141 SWSAP1Q6NVH7 229 aa19.39■□□□□ 0.7
NPAS3-202ENST00000356141 TEX13BQ9BXU2 312 aa19.39■□□□□ 0.7
NPAS3-202ENST00000356141 DOCK5Q9H7D0 1870 aa19.39■□□□□ 0.7
NPAS3-202ENST00000356141 GOLGA8IPA6NC78 632 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 GOLGA8JA6NMD2 632 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 SLC16A4O15374 487 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 PEX3P56589 373 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 SP2Q02086 613 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 MAP1SQ66K74 1059 aaPredicted RBP19.39■□□□□ 0.69
NPAS3-202ENST00000356141 CYFIP1Q7L576 1253 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 KIAA1328Q86T90 577 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 NLRX1Q86UT6 975 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 TMTC1Q8IUR5 882 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 TTYH3Q9C0H2 523 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 LACRTQ9GZZ8 138 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 DEF6Q9H4E7 631 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 RPTORQ8N122 1335 aa19.39■□□□□ 0.69
NPAS3-202ENST00000356141 NEK11Q8NG66 645 aa19.38■□□□□ 0.69
NPAS3-202ENST00000356141 PSMB7Q99436 277 aa19.38■□□□□ 0.69
NPAS3-202ENST00000356141 HDAC6Q9UBN7 1215 aa19.38■□□□□ 0.69
NPAS3-202ENST00000356141 A0A1W2PQC6 194 aa19.38■□□□□ 0.69
NPAS3-202ENST00000356141 FRMD3A2A2Y4 597 aa19.38■□□□□ 0.69
NPAS3-202ENST00000356141 CCDC169A6NNP5 214 aa19.38■□□□□ 0.69
NPAS3-202ENST00000356141 TGFB1I1O43294 461 aa19.38■□□□□ 0.69
NPAS3-202ENST00000356141 RAPGEF1Q13905 1077 aa19.38■□□□□ 0.69
NPAS3-202ENST00000356141 CDCA5Q96FF9 252 aa19.38■□□□□ 0.69
NPAS3-202ENST00000356141 ZNF668Q96K58 619 aaPredicted RBP19.38■□□□□ 0.69
NPAS3-202ENST00000356141 ZNHIT6Q9NWK9 470 aaKnown RBP19.38■□□□□ 0.69
NPAS3-202ENST00000356141 PITPNM2Q9BZ72 1349 aa19.38■□□□□ 0.69
NPAS3-202ENST00000356141 QARSP47897 775 aaKnown RBP19.38■□□□□ 0.69
NPAS3-202ENST00000356141 HERVK_113P62684 666 aa19.38■□□□□ 0.69
NPAS3-202ENST00000356141 ACAD9Q9H845 621 aa19.38■□□□□ 0.69
NPAS3-202ENST00000356141 P4HBP07237 508 aaKnown RBP19.37■□□□□ 0.69
NPAS3-202ENST00000356141 IRX3P78415 501 aaPredicted RBP19.37■□□□□ 0.69
NPAS3-202ENST00000356141 KCTD19Q17RG1 926 aaPredicted RBP19.37■□□□□ 0.69
NPAS3-202ENST00000356141 TMEM63BQ5T3F8 832 aa19.37■□□□□ 0.69
NPAS3-202ENST00000356141 HINFPQ9BQA5 517 aa19.37■□□□□ 0.69
NPAS3-202ENST00000356141 ARMCX3Q9UH62 379 aaPredicted RBP19.37■□□□□ 0.69
NPAS3-202ENST00000356141 FGFR1OPO95684 399 aaKnown RBP19.37■□□□□ 0.69
NPAS3-202ENST00000356141 EPHX2P34913 555 aa19.37■□□□□ 0.69
NPAS3-202ENST00000356141 EIF4A3P38919 411 aaKnown RBP19.37■□□□□ 0.69
NPAS3-202ENST00000356141 RARRES1P49788 294 aa19.37■□□□□ 0.69
NPAS3-202ENST00000356141 GFPT1Q06210 699 aaPredicted RBP19.37■□□□□ 0.69
NPAS3-202ENST00000356141 FAM133AQ8N9E0 248 aa19.37■□□□□ 0.69
NPAS3-202ENST00000356141 RIT2Q99578 217 aa19.37■□□□□ 0.69
NPAS3-202ENST00000356141 TXNRD2Q9NNW7 524 aa19.37■□□□□ 0.69
NPAS3-202ENST00000356141 ARHGAP20Q9P2F6 1191 aa19.37■□□□□ 0.69
NPAS3-202ENST00000356141 CYP2C8P10632 490 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 CCND2P30279 289 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 CCDC122Q5T0U0 273 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 DNAJC7Q99615 494 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.36■□□□□ 0.69
NPAS3-202ENST00000356141 ZMYM2Q9UBW7 1377 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 DOCK1Q14185 1865 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 C19orf81C9J6K1 198 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 ZNF263O14978 683 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 SRGAP2O75044 1071 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 PPP1R2P41236 205 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 MAPK7Q13164 816 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 TRIM14Q14142 442 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 VSIG10LQ86VR7 867 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 ZNF397Q8NF99 534 aaPredicted RBP19.36■□□□□ 0.69
NPAS3-202ENST00000356141 CCDC42Q96M95 316 aa19.36■□□□□ 0.69
NPAS3-202ENST00000356141 SEPT9Q9UHD8 586 aaPredicted RBP19.36■□□□□ 0.69
NPAS3-202ENST00000356141 AJAP1Q9UKB5 411 aaPredicted RBP19.36■□□□□ 0.69
NPAS3-202ENST00000356141 CCP110O43303 1012 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 KIF5CO60282 957 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 SLU7O95391 586 aaKnown RBP19.35■□□□□ 0.69
NPAS3-202ENST00000356141 ARHGAP25P42331 645 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 ZBED6P86452 979 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 Q3C1V9 767 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 DPY19L2Q6NUT2 758 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 B3GNT9Q6UX72 402 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 TRIM59Q8IWR1 403 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 NSUN6Q8TEA1 469 aaKnown RBP19.35■□□□□ 0.69
NPAS3-202ENST00000356141 ERGIC2Q96RQ1 377 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 FIZ1Q96SL8 496 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 HOXC10Q9NYD6 342 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 ZNF862O60290 1169 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms