RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 EPN1Q9Y6I3 576 aaPredicted RBP18.46■□□□□ 0.54
COL27A1-201ENST00000356083 PIK3R2O00459 728 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 PFKFB1P16118 471 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 IP6K1Q92551 441 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 SLC52A2Q9HAB3 445 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 FANCLQ9NW38 375 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 SRGAP2O75044 1071 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 PNMA3Q9UL41 463 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 SOS2Q07890 1332 aaPredicted RBP18.45■□□□□ 0.54
COL27A1-201ENST00000356083 SCAF11Q99590 1463 aaKnown RBP18.45■□□□□ 0.54
COL27A1-201ENST00000356083 CPB1P15086 417 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 ANKS3Q6ZW76 656 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 RPAINQ86UA6 219 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 GLYCTKQ8IVS8 523 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 ANKRD49Q8WVL7 239 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 KDM4CQ9H3R0 1056 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 SEL1LQ9UBV2 794 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 E9PMD0 336 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 MAP4P27816 1152 aaKnown RBP18.45■□□□□ 0.54
COL27A1-201ENST00000356083 RMDN1Q96DB5 314 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 LRRC37BQ96QE4 947 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 AP1M1Q9BXS5 423 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 MRFAP1Q9Y605 127 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 PRR23D1E9PI22 279 aaPredicted RBP18.45■□□□□ 0.54
COL27A1-201ENST00000356083 PRR23D2P0DMB1 279 aaPredicted RBP18.45■□□□□ 0.54
COL27A1-201ENST00000356083 ADCK5Q3MIX3 580 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 ERICH1Q86X53 443 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 TTC8Q8TAM2 541 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 TUBGCP2Q9BSJ2 902 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 SNX5Q9Y5X3 404 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 FOSP01100 380 aaPredicted RBP18.45■□□□□ 0.54
COL27A1-201ENST00000356083 ARMC2Q8NEN0 867 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 TTLL11Q8NHH1 800 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 RAET1EQ8TD07 263 aa18.45■□□□□ 0.54
COL27A1-201ENST00000356083 MAGI1Q96QZ7 1491 aaPredicted RBP18.44■□□□□ 0.54
COL27A1-201ENST00000356083 RUNDC3BQ96NL0 473 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 USE1Q9NZ43 259 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 IFT140Q96RY7 1462 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 AP1ARQ63HQ0 302 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 THNSL1Q8IYQ7 743 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 LARP4BQ92615 738 aaKnown RBP18.44■□□□□ 0.54
COL27A1-201ENST00000356083 KIFC3Q9BVG8 833 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 FANCAO15360 1455 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 OCA2Q04671 838 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 PPP2R5BQ15173 497 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 CCNYL1Q8N7R7 359 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 DCUN1D1Q96GG9 259 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 MRFAP1L1Q96HT8 127 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 VPS11Q9H270 941 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 A0A0G2JND7 137 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 AGRPO00253 132 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 RASGRF2O14827 1237 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 CTNND1O60716 968 aaKnown RBP18.44■□□□□ 0.54
COL27A1-201ENST00000356083 SLC16A1P53985 500 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 PWP1Q13610 501 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 PRAMEP78395 509 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 MRPL28Q13084 256 aaKnown RBP18.44■□□□□ 0.54
COL27A1-201ENST00000356083 TESK2Q96S53 571 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 KIAA1468Q9P260 1216 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 FBXO2Q9UK22 296 aaPredicted RBP18.44■□□□□ 0.54
COL27A1-201ENST00000356083 TNKSO95271 1327 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 ECEL1O95672 775 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 FTCDO95954 541 aa18.44■□□□□ 0.54
COL27A1-201ENST00000356083 HNRNPCP07910 306 aaKnown RBP eCLIP18.43■□□□□ 0.547e-10■□□□□ 9.4
COL27A1-201ENST00000356083 CCDC142Q17RM4 750 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 MCTP2Q6DN12 878 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 USP28Q96RU2 1077 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 TMEM106CQ9BVX2 250 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 PDE11AQ9HCR9 933 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 DMAP1Q9NPF5 467 aaPredicted RBP18.43■□□□□ 0.54
COL27A1-201ENST00000356083 IRF1P10914 325 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 USP17L2Q6R6M4 530 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 ZC3H18Q86VM9 953 aaKnown RBP18.43■□□□□ 0.54
COL27A1-201ENST00000356083 TEX14Q8IWB6 1497 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 ZNF804BA4D1E1 1349 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 SEC24BO95487 1268 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 KRT7P08729 469 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 TMPRSS15P98073 1019 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 TSC22D1Q15714 1073 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 SRRM1Q8IYB3 904 aaKnown RBP18.43■□□□□ 0.54
COL27A1-201ENST00000356083 CACNA1FO60840 1977 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 ADCY3O60266 1144 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 TRIM54Q9BYV2 358 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 IQANK1A0A1B0GTG1 560 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 KRT8P05787 483 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 KCNA6P17658 529 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 KRT72Q14CN4 511 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 EFTUD2Q15029 972 aaKnown RBP eCLIP18.43■□□□□ 0.542e-7■■■■□ 25.4
COL27A1-201ENST00000356083 DDX42Q86XP3 938 aaKnown RBP eCLIP18.43■□□□□ 0.54
COL27A1-201ENST00000356083 HS6ST3Q8IZP7 471 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 ASZ1Q8WWH4 475 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 DONSONQ9NYP3 566 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 MYO1DO94832 1006 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 DALRD3Q5D0E6 543 aaKnown RBP18.43■□□□□ 0.54
COL27A1-201ENST00000356083 CCHCR1Q8TD31 782 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 IQCDQ96DY2 449 aa18.43■□□□□ 0.54
COL27A1-201ENST00000356083 BTBD18B2RXH4 712 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 VAMP4O75379 141 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 RXRBP28702 533 aa18.42■□□□□ 0.54
COL27A1-201ENST00000356083 RFX3P48380 749 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms