RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ALDH8A1Q9H2A2 487 aaPredicted RBP8.15□□□□□ -1.1
VPS13A-201ENST00000355766 SOX17Q9H6I2 414 aaPredicted RBP8.15□□□□□ -1.1
VPS13A-201ENST00000355766 PI4KBQ9UBF8 816 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 CTNNA3Q9UI47 895 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 MTMR7Q9Y216 660 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 XIRP2A4UGR9 3374 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 CHD9Q3L8U1 2897 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 ROBO3Q96MS0 1386 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 METTL12A8MUP2 240 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 WDR64B1ANS9 1081 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 TIAF1O95411 115 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 ABL1P00519 1130 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 POLR3DP05423 398 aaPredicted RBP8.14□□□□□ -1.11
VPS13A-201ENST00000355766 GNAT2P19087 354 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 ADD2P35612 726 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 GSTO1P78417 241 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 ZNF211Q13398 564 aaPredicted RBP8.14□□□□□ -1.11
VPS13A-201ENST00000355766 ANKRD1Q15327 319 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 CCDC85BQ15834 202 aaPredicted RBP8.14□□□□□ -1.11
VPS13A-201ENST00000355766 METTL16Q86W50 562 aaKnown RBP8.14□□□□□ -1.11
VPS13A-201ENST00000355766 TEX11Q8IYF3 940 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 NSUN4Q96CB9 384 aaKnown RBP8.14□□□□□ -1.11
VPS13A-201ENST00000355766 FAM227BQ96M60 508 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.14□□□□□ -1.11
VPS13A-201ENST00000355766 BCL11AQ9H165 835 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 IL25Q9H293 177 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 DHX36Q9H2U1 1008 aaKnown RBP8.14□□□□□ -1.11
VPS13A-201ENST00000355766 SUGCTQ9HAC7 445 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 BTBD7Q9P203 1132 aa8.14□□□□□ -1.11
VPS13A-201ENST00000355766 WDR19Q8NEZ3 1342 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 A0A1W2PQ45 241 aaPredicted RBP8.13□□□□□ -1.11
VPS13A-201ENST00000355766 A0A1W2PQY0 241 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 PQBP1O60828 265 aaKnown RBP8.13□□□□□ -1.11
VPS13A-201ENST00000355766 LDHCP07864 332 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 VCAM1P19320 739 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 ADORA2AP29274 412 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 DDIT3P35638 169 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 IRAK1P51617 712 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 ZYXQ15942 572 aaKnown RBP8.13□□□□□ -1.11
VPS13A-201ENST00000355766 LCE3BQ5TA77 95 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 RASIP1Q5U651 963 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 VPS53Q5VIR6 699 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 CCDC129Q6ZRS4 1044 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 FBXL16Q8N461 479 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 CHMP4CQ96CF2 233 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 MFSD14AQ96MC6 490 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 FEZ1Q99689 392 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 ANTXR1Q9H6X2 564 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 TMEM39AQ9NV64 488 aa8.13□□□□□ -1.11
VPS13A-201ENST00000355766 RBM8AQ9Y5S9 174 aaKnown RBP8.13□□□□□ -1.11
VPS13A-201ENST00000355766 A0A0G2JMZ2 1700 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 FLT1P17948 1338 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 GRXCR1A8MXD5 290 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 DRD2P14416 443 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 GSTM4Q03013 218 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 FAAP100Q0VG06 881 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 PPIGQ13427 754 aaKnown RBP eCLIP8.12□□□□□ -1.11
VPS13A-201ENST00000355766 ALX1Q15699 326 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 RAB30Q15771 203 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 AAK1Q2M2I8 961 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 TMEM31Q5JXX7 168 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 CREB3L3Q68CJ9 461 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 CCDC174Q6PII3 467 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 CATSPERGQ6ZRH7 1159 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 ANKRD33Q7Z3H0 272 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 DPP9Q86TI2 863 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 ZNF589Q86UQ0 364 aaPredicted RBP8.12□□□□□ -1.11
VPS13A-201ENST00000355766 CRACR2BQ8N4Y2 399 aaPredicted RBP8.12□□□□□ -1.11
VPS13A-201ENST00000355766 SLC44A5Q8NCS7 719 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 SH3RF3Q8TEJ3 882 aaPredicted RBP8.12□□□□□ -1.11
VPS13A-201ENST00000355766 CYP4F12Q9HCS2 524 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 XPNPEP3Q9NQH7 507 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 SNX14Q9Y5W7 946 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 PIEZO1Q92508 2521 aa8.12□□□□□ -1.11
VPS13A-201ENST00000355766 LAMA4Q16363 1823 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 TCRBV5S4A2TA0A5A2 114 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 SLC27A2O14975 620 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 STRNO43815 780 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 TIMP1P01033 207 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 GH2P01242 217 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 RARBP10826 455 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 PCP11498 1178 aaKnown RBP8.11□□□□□ -1.11
VPS13A-201ENST00000355766 PDE6AP16499 860 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 KCNQ1P51787 676 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 NEK4P51957 841 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 USP14P54578 494 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 TFF2Q03403 129 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 PTH1RQ03431 593 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 CUL4AQ13619 759 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 EXOSC6Q5RKV6 272 aaKnown RBP8.11□□□□□ -1.11
VPS13A-201ENST00000355766 TMEM240Q5SV17 173 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 SLC9C2Q5TAH2 1124 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 MFSD5Q6N075 450 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 GIMAP6Q6P9H5 292 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 PSRC1Q6PGN9 363 aaPredicted RBP8.11□□□□□ -1.11
VPS13A-201ENST00000355766 PI16Q6UXB8 463 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 RNF180Q86T96 592 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
VPS13A-201ENST00000355766 FOXP4Q8IVH2 680 aaPredicted RBP8.11□□□□□ -1.11
VPS13A-201ENST00000355766 MAPKAPK5Q8IW41 473 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms