RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 ATP6V0A4Q9HBG4 840 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 GPRC5CQ9NQ84 441 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 LRRC53A6NM62 1247 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 H0YCG3 227 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 GOLGA8SH3BPF8 625 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 TNPO2O14787 897 aaKnown RBP13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 MED24O75448 989 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 GBP2P32456 591 aaPredicted RBP13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 MNAT1P51948 309 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 SARM1Q6SZW1 724 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 FASTKD5Q7L8L6 764 aaKnown RBP13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 TUBE1Q9UJT0 475 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 MTUS1Q9ULD2 1270 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 NUB1Q9Y5A7 615 aa13.43□□□□□ -0.26
PCDHB11-201ENST00000354757 WNT7AO00755 349 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 CLDN3O15551 220 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 HSF2BPO75031 334 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 MOCS3O95396 460 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 STAT5BP51692 787 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 SLC8A3P57103 927 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 CATSPER4Q7RTX7 472 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 XXYLT1Q8NBI6 393 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 POLR3FQ9H1D9 316 aaPredicted RBP13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 ADARB2Q9NS39 739 aaKnown RBP13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 FAM184BQ9ULE4 1060 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 TOPAZ1Q8N9V7 1692 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 ESYT2A0FGR8 921 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 GRIN3BO60391 1043 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 EYA4O95677 639 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 CDC25BP30305 580 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 CLCN6P51797 869 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 KIF11P52732 1056 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 LRRC71Q8N4P6 559 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 CCDC155Q8N6L0 562 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 TRPM4Q8TD43 1214 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 ZCCHC17Q9NP64 241 aaKnown RBP13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 LMO7Q8WWI1 1683 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 DYNC1LI2O43237 492 aaPredicted RBP13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 ABL1P00519 1130 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 VIL1P09327 827 aaKnown RBP13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 CD44P16070 742 aaKnown RBP13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 PTK2Q05397 1052 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 NEDD9Q14511 834 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 TTLL4Q14679 1199 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 SPOUT1Q5T280 376 aaKnown RBP13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 FMNL3Q8IVF7 1028 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 ADSSL1Q8N142 457 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 RNF149Q8NC42 400 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 MCPH1Q8NEM0 835 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 CAMKK2Q96RR4 588 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 MXRA8Q9BRK3 442 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 RABEP2Q9H5N1 569 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 TMEM150BA6NC51 233 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 ZNF233A6NK53 670 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 GYS2P54840 703 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 TRIM58Q8NG06 486 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 UBLCP1Q8WVY7 318 aaPredicted RBP13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 PSPC1Q8WXF1 523 aaKnown RBP13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 ASIC3Q9UHC3 531 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 TTLL3Q9Y4R7 772 aa13.42□□□□□ -0.26
PCDHB11-201ENST00000354757 A0A087X0B3 334 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 AP5Z1O43299 807 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 ICAM1P05362 532 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 ATF7P17544 494 aaPredicted RBP13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 MAPK6Q16659 721 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 FAM83AQ86UY5 434 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 CCDC105Q8IYK2 499 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 MICALL1Q8N3F8 863 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 PAIP2Q9BPZ3 127 aaKnown RBP13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 AMFRQ9UKV5 643 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 SETD1AO15047 1707 aaKnown RBP13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 KCPQ6ZWJ8 1503 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 N4BP1O75113 896 aaKnown RBP13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 NSFP46459 744 aaKnown RBP13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 ACOT2P49753 483 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 PSMC6P62333 389 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 SF3A3Q12874 501 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 CALCOCO2Q13137 446 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 SNAPC2Q13487 334 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 UBL4BQ8N7F7 174 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 CHP1Q99653 195 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 RASAL2Q9UJF2 1139 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 DNAJC12Q9UKB3 198 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 ZBTB39O15060 712 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 THAP12O43422 761 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 KIAA0754O94854 1291 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 GRB10Q13322 594 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 TTC31Q49AM3 519 aaPredicted RBP13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 PASD1Q8IV76 773 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 MAK16Q9BXY0 300 aaKnown RBP13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 PPP1R9AQ9ULJ8 1098 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 CD2APQ9Y5K6 639 aa13.41□□□□□ -0.26
PCDHB11-201ENST00000354757 FXR1P51114 621 aaKnown RBP eCLIP13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 KAZNQ674X7 775 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 GMCL1Q96IK5 515 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 ABHD10Q9NUJ1 306 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 AGPAT5Q9NUQ2 364 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 ACTN1P12814 892 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 SFNP31947 248 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms