RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 KRT76Q01546 638 aa18.22■□□□□ 0.51
DDX55-202ENST00000354291 ITIH3Q06033 890 aa18.22■□□□□ 0.51
DDX55-202ENST00000354291 SLC35G1Q2M3R5 365 aa18.22■□□□□ 0.51
DDX55-202ENST00000354291 PCNX4Q63HM2 1172 aa18.22■□□□□ 0.51
DDX55-202ENST00000354291 TDRD5Q8NAT2 981 aaKnown RBP18.22■□□□□ 0.51
DDX55-202ENST00000354291 SMARCC2Q8TAQ2 1214 aa18.22■□□□□ 0.51
DDX55-202ENST00000354291 TRAPPC12Q8WVT3 735 aa18.22■□□□□ 0.51
DDX55-202ENST00000354291 OSBPL3Q9H4L5 887 aa18.22■□□□□ 0.51
DDX55-202ENST00000354291 CWH43Q9H720 699 aa18.22■□□□□ 0.51
DDX55-202ENST00000354291 LZTS1Q9Y250 596 aa18.22■□□□□ 0.51
DDX55-202ENST00000354291 BAZ2BQ9UIF8 2168 aaKnown RBP18.22■□□□□ 0.51
DDX55-202ENST00000354291 FRMPD4Q14CM0 1322 aa18.22■□□□□ 0.51
DDX55-202ENST00000354291 LMNAP02545 664 aaKnown RBP18.21■□□□□ 0.51
DDX55-202ENST00000354291 FGFR1P11362 822 aa18.21■□□□□ 0.51
DDX55-202ENST00000354291 LAG3P18627 525 aa18.21■□□□□ 0.51
DDX55-202ENST00000354291 CA8P35219 290 aa18.21■□□□□ 0.51
DDX55-202ENST00000354291 MTHFRP42898 656 aa18.21■□□□□ 0.51
DDX55-202ENST00000354291 PLCB3Q01970 1234 aa18.21■□□□□ 0.51
DDX55-202ENST00000354291 CWF19L1Q69YN2 538 aaKnown RBP18.21■□□□□ 0.51
DDX55-202ENST00000354291 USP17L6PQ6QN14 398 aa18.21■□□□□ 0.51
DDX55-202ENST00000354291 PLEKHM2Q8IWE5 1019 aa18.21■□□□□ 0.51
DDX55-202ENST00000354291 C12orf76Q8N812 135 aaPredicted RBP18.21■□□□□ 0.51
DDX55-202ENST00000354291 KRT23Q9C075 422 aa18.21■□□□□ 0.51
DDX55-202ENST00000354291 RIOX1Q9H6W3 641 aa18.21■□□□□ 0.51
DDX55-202ENST00000354291 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
DDX55-202ENST00000354291 PCDHA2Q9Y5H9 948 aa18.21■□□□□ 0.51
DDX55-202ENST00000354291 KCNA2P16389 499 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 AOC1P19801 751 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 KRT17Q04695 432 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 RARS2Q5T160 578 aaKnown RBP18.2■□□□□ 0.5
DDX55-202ENST00000354291 KANK3Q6NY19 840 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 XRRA1Q6P2D8 792 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 SLC24A5Q71RS6 500 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 CCDC105Q8IYK2 499 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 ZDHHC14Q8IZN3 488 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 DTWD2Q8NBA8 298 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 CUL5Q93034 780 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 HINFPQ9BQA5 517 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 ATP6V0A4Q9HBG4 840 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 RGS18Q9NS28 235 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 DBR1Q9UK59 544 aaKnown RBP18.2■□□□□ 0.5
DDX55-202ENST00000354291 HCFC2Q9Y5Z7 792 aa18.2■□□□□ 0.5
DDX55-202ENST00000354291 STK25O00506 426 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 RPS6KA5O75582 802 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 NPR3P17342 541 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 SDSP20132 328 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 PBX3P40426 434 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 PUM1Q14671 1186 aaKnown RBP eCLIP18.19■□□□□ 0.5
DDX55-202ENST00000354291 ATAT1Q5SQI0 421 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 PLCD3Q8N3E9 789 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 NME8Q8N427 588 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 TNPO1Q92973 898 aaKnown RBP18.19■□□□□ 0.5
DDX55-202ENST00000354291 CNTNAP3BQ96NU0 1288 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 CNTNAP3Q9BZ76 1288 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 AZI2Q9H6S1 392 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 ERVK-5Q9HDB9 667 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 C1orf112Q9NSG2 853 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 FBXL21Q9UKT6 434 aa18.19■□□□□ 0.5
DDX55-202ENST00000354291 NOC2LQ9Y3T9 749 aaKnown RBP18.19■□□□□ 0.5
DDX55-202ENST00000354291 CEP250Q9BV73 2442 aa18.18■□□□□ 0.5
DDX55-202ENST00000354291 C9IYK1 514 aa18.18■□□□□ 0.5
DDX55-202ENST00000354291 CYTH3O43739 400 aa18.18■□□□□ 0.5
DDX55-202ENST00000354291 PDE4AP27815 886 aa18.18■□□□□ 0.5
DDX55-202ENST00000354291 PLCB4Q15147 1175 aa18.18■□□□□ 0.5
DDX55-202ENST00000354291 IMMTQ16891 758 aaKnown RBP18.18■□□□□ 0.5
DDX55-202ENST00000354291 KCNT2Q6UVM3 1135 aa18.18■□□□□ 0.5
DDX55-202ENST00000354291 MRPL43Q8N983 215 aaKnown RBP18.18■□□□□ 0.5
DDX55-202ENST00000354291 GPRASP2Q96D09 838 aa18.18■□□□□ 0.5
DDX55-202ENST00000354291 CDHR1Q96JP9 859 aa18.18■□□□□ 0.5
DDX55-202ENST00000354291 RTP3Q9BQQ7 232 aa18.18■□□□□ 0.5
DDX55-202ENST00000354291 CDHR5Q9HBB8 845 aa18.18■□□□□ 0.5
DDX55-202ENST00000354291 ST3GAL5Q9UNP4 418 aa18.18■□□□□ 0.5
DDX55-202ENST00000354291 R4GN57 208 aa18.18■□□□□ 0.5
DDX55-202ENST00000354291 HIP1O00291 1037 aa18.17■□□□□ 0.5
DDX55-202ENST00000354291 CLASP2O75122 1294 aaKnown RBP18.17■□□□□ 0.5
DDX55-202ENST00000354291 SMC1AQ14683 1233 aaKnown RBP18.17■□□□□ 0.5
DDX55-202ENST00000354291 GRM4Q14833 912 aa18.17■□□□□ 0.5
DDX55-202ENST00000354291 SEC23AQ15436 765 aa18.17■□□□□ 0.5
DDX55-202ENST00000354291 LRRC55Q6ZSA7 311 aa18.17■□□□□ 0.5
DDX55-202ENST00000354291 TMEM87AQ8NBN3 555 aa18.17■□□□□ 0.5
DDX55-202ENST00000354291 ZNF558Q96NG5 402 aa18.17■□□□□ 0.5
DDX55-202ENST00000354291 PCYT2Q99447 389 aa18.17■□□□□ 0.5
DDX55-202ENST00000354291 SEMA4AQ9H3S1 761 aa18.17■□□□□ 0.5
DDX55-202ENST00000354291 CNNM2Q9H8M5 875 aa18.17■□□□□ 0.5
DDX55-202ENST00000354291 CYP26B1Q9NR63 512 aa18.17■□□□□ 0.5
DDX55-202ENST00000354291 SPG21Q9NZD8 308 aa18.17■□□□□ 0.5
DDX55-202ENST00000354291 KDM3AQ9Y4C1 1321 aa18.17■□□□□ 0.5
DDX55-202ENST00000354291 SPTBN2O15020 2390 aa18.16■□□□□ 0.5
DDX55-202ENST00000354291 SMIM35A0A1B0GVV1 85 aa18.16■□□□□ 0.5
DDX55-202ENST00000354291 C2orf71A6NGG8 1288 aa18.16■□□□□ 0.5
DDX55-202ENST00000354291 CXCL14O95715 111 aa18.16■□□□□ 0.5
DDX55-202ENST00000354291 ITGB5P18084 799 aa18.16■□□□□ 0.5
DDX55-202ENST00000354291 MTHFD1LQ6UB35 978 aa18.16■□□□□ 0.5
DDX55-202ENST00000354291 CWC27Q6UX04 472 aaKnown RBP18.16■□□□□ 0.5
DDX55-202ENST00000354291 SIX5Q8N196 739 aa18.16■□□□□ 0.5
DDX55-202ENST00000354291 CYP2W1Q8TAV3 490 aa18.16■□□□□ 0.5
DDX55-202ENST00000354291 DIAPH3Q9NSV4 1193 aa18.16■□□□□ 0.5
DDX55-202ENST00000354291 TMEM161AQ9NX61 479 aa18.16■□□□□ 0.5
DDX55-202ENST00000354291 ACACBO00763 2458 aa18.15■□□□□ 0.5
DDX55-202ENST00000354291 MEIS2O14770 477 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms