RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SPTY2D1Q68D10 685 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 SAMD1Q6SPF0 538 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 RAB3IPQ96QF0 476 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 SLITRK6Q9H5Y7 841 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 PIDD1Q9HB75 910 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 C2CD2Q9Y426 696 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 C5P01031 1676 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 TMEM110-MUSTN1A8MSY1 372 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 H2AFZP0C0S5 128 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 STX2P32856 288 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 IGHMBP2P38935 993 aaKnown RBP8.27□□□□□ -1.08
BRCA1-201ENST00000352993 PTK2Q05397 1052 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 GRIPAP1Q4V328 841 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 CWF19L1Q69YN2 538 aaKnown RBP8.27□□□□□ -1.08
BRCA1-201ENST00000352993 FAM47EQ6ZV65 393 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 H2AFVQ71UI9 128 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 MYOCDQ8IZQ8 938 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 GBP7Q8N8V2 638 aaPredicted RBP8.27□□□□□ -1.08
BRCA1-201ENST00000352993 GLIS3Q8NEA6 775 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 ACTRT1Q8TDG2 376 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 ATXN2LQ8WWM7 1075 aaKnown RBP8.27□□□□□ -1.08
BRCA1-201ENST00000352993 CNKSR1Q969H4 720 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 TLCD1Q96CP7 247 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 C7orf25Q9BPX7 421 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 ISCA1Q9BUE6 129 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 CUEDC2Q9H467 287 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 RASAL2Q9UJF2 1139 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 CAMTA1Q9Y6Y1 1673 aa8.27□□□□□ -1.08
BRCA1-201ENST00000352993 MYMKA6NI61 221 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 FLOT1O75955 427 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 KRT18P05783 430 aaKnown RBP8.27□□□□□ -1.09
BRCA1-201ENST00000352993 FESP07332 822 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 MYBP10242 640 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 NAPAP54920 295 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 MKRN4PQ13434 485 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-201ENST00000352993 SETDB1Q15047 1291 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 LLGL1Q15334 1064 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 ZNF449Q6P9G9 518 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 SPATA21Q7Z572 469 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 TEX9Q8N6V9 391 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 B4GALNT2Q8NHY0 566 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 FBXO25Q8TCJ0 367 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 NUDCD1Q96RS6 583 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 MTA3Q9BTC8 594 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 VCXQ9H320 206 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 PABPC3Q9H361 631 aaKnown RBP8.27□□□□□ -1.09
BRCA1-201ENST00000352993 SEMA4AQ9H3S1 761 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 MMP13P45452 471 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 FKBP3Q00688 224 aaKnown RBP8.27□□□□□ -1.09
BRCA1-201ENST00000352993 CACNB1Q02641 598 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-201ENST00000352993 DCAF17Q5H9S7 520 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-201ENST00000352993 EIF1ADQ8N9N8 165 aaKnown RBP8.27□□□□□ -1.09
BRCA1-201ENST00000352993 CNBD1Q8NA66 436 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 CABLES1Q8TDN4 633 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 ARL2BPQ9Y2Y0 163 aa8.27□□□□□ -1.09
BRCA1-201ENST00000352993 NID2Q14112 1375 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 PYGLP06737 847 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 CSF1RP07333 972 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 RFC5P40937 340 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 ROR2Q01974 943 aaKnown RBP8.26□□□□□ -1.09
BRCA1-201ENST00000352993 LRRC63Q05C16 580 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 KLC1Q07866 573 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 LONRF1Q17RB8 773 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 MFN1Q8IWA4 741 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 RPS6KC1Q96S38 1066 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 EDEM3Q9BZQ6 932 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 MAGEF1Q9HAY2 307 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 TBK1Q9UHD2 729 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 TMEM59LQ9UK28 342 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 PCDHA6Q9UN73 950 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 PTPN22Q9Y2R2 807 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 NR2E1Q9Y466 385 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 PCDHA8Q9Y5H6 950 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 TNS3Q68CZ2 1445 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 MYH7P12883 1935 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 SHANK3Q9BYB0 1731 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 MYH1P12882 1939 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 KAT6BQ8WYB5 2073 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 ACSL3O95573 720 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 AGTP01019 485 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 GOLGA8HP0CJ92 632 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 MRPS35P82673 323 aaKnown RBP8.26□□□□□ -1.09
BRCA1-201ENST00000352993 LRRC23Q53EV4 343 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-201ENST00000352993 UNC13DQ70J99 1090 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 KRT28Q7Z3Y7 464 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 MARCH10Q8NA82 808 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-201ENST00000352993 TPCN2Q8NHX9 752 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 LARP4BQ92615 738 aaKnown RBP8.26□□□□□ -1.09
BRCA1-201ENST00000352993 ARHGEF2Q92974 986 aaKnown RBP8.26□□□□□ -1.09
BRCA1-201ENST00000352993 RNF25Q96BH1 459 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-201ENST00000352993 CPVLQ9H3G5 476 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 BMP2KQ9NSY1 1161 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-201ENST00000352993 DNAJC17Q9NVM6 304 aaKnown RBP8.26□□□□□ -1.09
BRCA1-201ENST00000352993 ARPP21Q9UBL0 812 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-201ENST00000352993 NKX1-2Q9UD57 310 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-201ENST00000352993 ZMYND8Q9ULU4 1186 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-201ENST00000352993 ARFGEF2Q9Y6D5 1785 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 TMEM120BA0PK00 339 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 BCL9O00512 1426 aa8.26□□□□□ -1.09
BRCA1-201ENST00000352993 PPFIA2O75334 1257 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms