RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ARHGAP25P42331 645 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 IREB2P48200 963 aaKnown RBP7.63□□□□□ -1.19
TRIM55-203ENST00000350034 RARRES1P49788 294 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 PSMC5P62195 406 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 PPP2R3AQ06190 1150 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 ADAM9Q13443 819 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 MOGSQ13724 837 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 PRKG1Q13976 671 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 MYBPC2Q14324 1141 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 TREML2Q5T2D2 321 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 DPY19L2P1Q6NXN4 242 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 PADI6Q6TGC4 694 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 SYT10Q6XYQ8 523 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 ERO1BQ86YB8 467 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 BANK1Q8NDB2 785 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 TMEM174Q8WUU8 243 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 BAP1Q92560 729 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 CDCA5Q96FF9 252 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 IWS1Q96ST2 819 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 CHP1Q99653 195 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 DESI2Q9BSY9 194 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 TIPINQ9BVW5 301 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 ST6GALNAC4Q9H4F1 302 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 ZHX3Q9H4I2 956 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 ANKEF1Q9NU02 776 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 AGPAT5Q9NUQ2 364 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 DMAC2Q9NW81 257 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 REXO2Q9Y3B8 237 aaKnown RBP7.63□□□□□ -1.19
TRIM55-203ENST00000350034 CSADQ9Y600 493 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 EPN1Q9Y6I3 576 aaPredicted RBP7.63□□□□□ -1.19
TRIM55-203ENST00000350034 SFI1A8K8P3 1242 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 PES1O00541 588 aaKnown RBP7.62□□□□□ -1.19
TRIM55-203ENST00000350034 HIP1RO75146 1068 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 CNMDO75829 334 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 NOL4O94818 638 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 NDUFA10O95299 355 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 GCNT3O95395 438 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 TRIM21P19474 475 aaKnown RBP7.62□□□□□ -1.19
TRIM55-203ENST00000350034 NR2F2P24468 414 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 EDNRBP24530 442 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 RPL13P26373 211 aaKnown RBP7.62□□□□□ -1.19
TRIM55-203ENST00000350034 NMT1P30419 496 aaKnown RBP7.62□□□□□ -1.19
TRIM55-203ENST00000350034 EPHX2P34913 555 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 MCCD1P59942 119 aaPredicted RBP7.62□□□□□ -1.19
TRIM55-203ENST00000350034 KCNA1Q09470 495 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 PPIL2Q13356 520 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 ALCAMQ13740 583 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 UGCGQ16739 394 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 CCDC40Q4G0X9 1142 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 LDLRAD1Q5T700 205 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 DPY19L2Q6NUT2 758 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 PDXDC1Q6P996 788 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 STXBP4Q6ZWJ1 553 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 SLC9A9Q8IVB4 645 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 CCDC170Q8IYT3 715 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 ANKRD13AQ8IZ07 590 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 MYCT1Q8N699 235 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 SLC17A8Q8NDX2 589 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 DNERQ8NFT8 737 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 ZNF592Q92610 1267 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 SYN2Q92777 582 aaPredicted RBP7.62□□□□□ -1.19
TRIM55-203ENST00000350034 CDHR1Q96JP9 859 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 MKNK1Q9BUB5 465 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 MOV10L1Q9BXT6 1211 aaKnown RBP7.62□□□□□ -1.19
TRIM55-203ENST00000350034 METTL14Q9HCE5 456 aaKnown RBP7.62□□□□□ -1.19
TRIM55-203ENST00000350034 PKD2L1Q9P0L9 805 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 BTBD7Q9P203 1132 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 FBXO40Q9UH90 709 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 DNAI1Q9UI46 699 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 PLAGL2Q9UPG8 496 aa7.62□□□□□ -1.19
TRIM55-203ENST00000350034 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.62□□□□□ -1.19
TRIM55-203ENST00000350034 LOC285556D6RIA3 1793 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 A0A0G2JMZ2 1700 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 PFASO15067 1338 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 A0A0U1RQJ8 604 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 TESPA1A2RU30 521 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 GLTPD2A6NH11 291 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 EIF3CLB5ME19 914 aaKnown RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 ZNF862O60290 1169 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 AKAP3O75969 853 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 ATG7O95352 703 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 LCA5LO95447 670 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 PLS3P13797 630 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 YWHABP31946 246 aaKnown RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 NF2P35240 595 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 HERVK_113P62684 666 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 TSR1Q2NL82 804 aaKnown RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 ASTE1Q2TB18 679 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 ZC2HC1CQ53FD0 456 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 ODR4Q5SWX8 454 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 FAM178BQ8IXR5 827 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 C12orf56Q8IXR9 622 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 SMAP1Q8IYB5 467 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 CCDC155Q8N6L0 562 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 FAM133AQ8N9E0 248 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 ACRBPQ8NEB7 543 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 ZNF397Q8NF99 534 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 GOLGA5Q8TBA6 731 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 SMCR8Q8TEV9 937 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 ATRIPQ8WXE1 791 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms