RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 LARP1BQ659C4 914 aaKnown RBP24.82■■□□□ 1.56
SNX3-202ENST00000349379 NCAPH2Q6IBW4 605 aa24.82■■□□□ 1.56
SNX3-202ENST00000349379 TRMT1LQ7Z2T5 733 aaKnown RBP24.82■■□□□ 1.56
SNX3-202ENST00000349379 KIAA0319LQ8IZA0 1049 aa24.82■■□□□ 1.56
SNX3-202ENST00000349379 WRAP73Q9P2S5 460 aaPredicted RBP24.82■■□□□ 1.56
SNX3-202ENST00000349379 CDY2AQ9Y6F7 541 aa24.82■■□□□ 1.56
SNX3-202ENST00000349379 SLC4A7Q9Y6M7 1214 aa24.82■■□□□ 1.56
SNX3-202ENST00000349379 KDM3AQ9Y4C1 1321 aa24.82■■□□□ 1.56
SNX3-202ENST00000349379 H3BQV1 296 aa24.81■■□□□ 1.56
SNX3-202ENST00000349379 MAGEB2O15479 319 aa24.81■■□□□ 1.56
SNX3-202ENST00000349379 TXKP42681 527 aa24.81■■□□□ 1.56
SNX3-202ENST00000349379 NBR1Q14596 966 aa24.81■■□□□ 1.56
SNX3-202ENST00000349379 C4orf32Q8N8J7 132 aa24.81■■□□□ 1.56
SNX3-202ENST00000349379 DBF4BQ8NFT6 615 aa24.81■■□□□ 1.56
SNX3-202ENST00000349379 ABHD14A-ACY1A0A1B0GW23 586 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 ZBBXA8MT70 800 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 GRXCR1A8MXD5 290 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 DKC1O60832 514 aaKnown RBP eCLIP24.8■■□□□ 1.56
SNX3-202ENST00000349379 OR52Z1P0C646 297 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 IER5Q5VY09 327 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 ANO5Q75V66 913 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 C4orf19Q8IY42 314 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 SLC9A7Q96T83 725 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 HSD17B14Q9BPX1 270 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 LXNQ9BS40 222 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 RGL1Q9NZL6 768 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 SEPT9Q9UHD8 586 aaPredicted RBP24.8■■□□□ 1.56
SNX3-202ENST00000349379 TRPV2Q9Y5S1 764 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 SQORQ9Y6N5 450 aa24.8■■□□□ 1.56
SNX3-202ENST00000349379 TMEM150BA6NC51 233 aa24.79■■□□□ 1.56
SNX3-202ENST00000349379 EFCAB14O75071 495 aa24.79■■□□□ 1.56
SNX3-202ENST00000349379 WDR5P61964 334 aaKnown RBP24.79■■□□□ 1.56
SNX3-202ENST00000349379 LPIN1Q14693 890 aa24.79■■□□□ 1.56
SNX3-202ENST00000349379 FBXO47Q5MNV8 452 aa24.79■■□□□ 1.56
SNX3-202ENST00000349379 MCTP1Q6DN14 999 aa24.79■■□□□ 1.56
SNX3-202ENST00000349379 PHOSPHO2Q8TCD6 241 aa24.79■■□□□ 1.56
SNX3-202ENST00000349379 NEK9Q8TD19 979 aa24.79■■□□□ 1.56
SNX3-202ENST00000349379 DYDC2Q96IM9 177 aa24.79■■□□□ 1.56
SNX3-202ENST00000349379 PBX4Q9BYU1 374 aa24.79■■□□□ 1.56
SNX3-202ENST00000349379 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.79■■□□□ 1.56
SNX3-202ENST00000349379 PCDHB6Q9Y5E3 794 aa24.79■■□□□ 1.56
SNX3-202ENST00000349379 SLITRK3O94933 977 aa24.78■■□□□ 1.56
SNX3-202ENST00000349379 IKBKEQ14164 716 aa24.78■■□□□ 1.56
SNX3-202ENST00000349379 RILPL1Q5EBL4 403 aa24.78■■□□□ 1.56
SNX3-202ENST00000349379 SEPT8Q92599 483 aa24.78■■□□□ 1.56
SNX3-202ENST00000349379 APBB2Q92870 758 aa24.78■■□□□ 1.56
SNX3-202ENST00000349379 EIF2AK1Q9BQI3 630 aaKnown RBP24.78■■□□□ 1.56
SNX3-202ENST00000349379 CELF4Q9BZC1 486 aaKnown RBP24.78■■□□□ 1.56
SNX3-202ENST00000349379 MYH15Q9Y2K3 1946 aa24.78■■□□□ 1.56
SNX3-202ENST00000349379 TTC3P53804 2025 aa24.78■■□□□ 1.56
SNX3-202ENST00000349379 IGKV6-21A0A0C4DH24 114 aa24.77■■□□□ 1.56
SNX3-202ENST00000349379 POTEMA6NI47 508 aa24.77■■□□□ 1.56
SNX3-202ENST00000349379 LYPLA2O95372 231 aa24.77■■□□□ 1.56
SNX3-202ENST00000349379 GHRP10912 638 aa24.77■■□□□ 1.56
SNX3-202ENST00000349379 ATP2A2P16615 1042 aaKnown RBP24.77■■□□□ 1.56
SNX3-202ENST00000349379 PDCP20941 246 aa24.77■■□□□ 1.56
SNX3-202ENST00000349379 TMEM62Q0P6H9 643 aa24.77■■□□□ 1.56
SNX3-202ENST00000349379 MTERF2Q49AM1 385 aa24.77■■□□□ 1.56
SNX3-202ENST00000349379 IFIH1Q9BYX4 1025 aaKnown RBP24.77■■□□□ 1.56
SNX3-202ENST00000349379 ZSWIM4Q9H7M6 989 aa24.77■■□□□ 1.56
SNX3-202ENST00000349379 TMEM265A0A087WTH1 108 aa24.76■■□□□ 1.55
SNX3-202ENST00000349379 M0QZ92 97 aa24.76■■□□□ 1.55
SNX3-202ENST00000349379 DNAJB2P25686 324 aa24.76■■□□□ 1.55
SNX3-202ENST00000349379 PBX2P40425 430 aa24.76■■□□□ 1.55
SNX3-202ENST00000349379 CLCN3P51790 818 aa24.76■■□□□ 1.55
SNX3-202ENST00000349379 CYP4A11Q02928 519 aa24.76■■□□□ 1.55
SNX3-202ENST00000349379 TBC1D8BQ0IIM8 1120 aa24.76■■□□□ 1.55
SNX3-202ENST00000349379 CTTNQ14247 550 aaKnown RBP24.76■■□□□ 1.55
SNX3-202ENST00000349379 EFCAB12Q6NXP0 572 aa24.76■■□□□ 1.55
SNX3-202ENST00000349379 TSHZ1Q6ZSZ6 1077 aa24.76■■□□□ 1.55
SNX3-202ENST00000349379 USP38Q8NB14 1042 aa24.76■■□□□ 1.55
SNX3-202ENST00000349379 AGO3Q9H9G7 860 aaKnown RBP24.76■■□□□ 1.55
SNX3-202ENST00000349379 PPME1Q9Y570 386 aa24.76■■□□□ 1.55
SNX3-202ENST00000349379 DDX11L8A8MPP1 907 aa24.75■■□□□ 1.55
SNX3-202ENST00000349379 KCNJ6P48051 423 aa24.75■■□□□ 1.55
SNX3-202ENST00000349379 FXR2P51116 673 aaKnown RBP eCLIP24.75■■□□□ 1.55
SNX3-202ENST00000349379 DEFB103AP81534 67 aa24.75■■□□□ 1.55
SNX3-202ENST00000349379 PTGDRQ13258 359 aa24.75■■□□□ 1.55
SNX3-202ENST00000349379 PLA2G4FQ68DD2 849 aa24.75■■□□□ 1.55
SNX3-202ENST00000349379 LRRC71Q8N4P6 559 aa24.75■■□□□ 1.55
SNX3-202ENST00000349379 METTL13Q8N6R0 699 aa24.75■■□□□ 1.55
SNX3-202ENST00000349379 SH2D3AQ9BRG2 576 aa24.75■■□□□ 1.55
SNX3-202ENST00000349379 CYP26B1Q9NR63 512 aa24.75■■□□□ 1.55
SNX3-202ENST00000349379 MYO9BQ13459 2157 aa24.74■■□□□ 1.55
SNX3-202ENST00000349379 LAD1O00515 517 aa24.74■■□□□ 1.55
SNX3-202ENST00000349379 GPR32O75388 356 aa24.74■■□□□ 1.55
SNX3-202ENST00000349379 MAFO75444 373 aaPredicted RBP24.74■■□□□ 1.55
SNX3-202ENST00000349379 YWHABP31946 246 aaKnown RBP24.74■■□□□ 1.55
SNX3-202ENST00000349379 TECP42680 631 aa24.74■■□□□ 1.55
SNX3-202ENST00000349379 RAB30Q15771 203 aa24.74■■□□□ 1.55
SNX3-202ENST00000349379 HERC6Q8IVU3 1022 aa24.74■■□□□ 1.55
SNX3-202ENST00000349379 VTNP04004 478 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 SPATA31C1P0DKV0 1188 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 SYT1P21579 422 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 TMOD1P28289 359 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 PRPHP41219 470 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 NPEPPSP55786 919 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 DRP2Q13474 957 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 ZNF697Q5TEC3 545 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms