RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 EIF2B2P49770 351 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 WDR60Q8WVS4 1066 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 ZKSCAN4Q969J2 545 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 CNOT6LQ96LI5 555 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 STAP2Q9UGK3 403 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 WDR37Q9Y2I8 494 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 HYOU1Q9Y4L1 999 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 INO80B-WBP1J3KQ70 363 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 MMP10P09238 476 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 OSBPP22059 807 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 ADCY8P40145 1251 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 ABL2P42684 1182 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 PALM2Q8IXS6 379 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 DNAJC9Q8WXX5 260 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 CCDC17Q96LX7 622 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 INO80BQ9C086 356 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 ATP7BP35670 1465 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 SNAP23O00161 211 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 BMP3P12645 472 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 S100A1P23297 94 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 SLC12A2P55011 1212 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 RASGRF1Q13972 1273 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 GPATCH4Q5T3I0 446 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 FAM133AQ8N9E0 248 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 RAB17Q9H0T7 212 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 EURLQ9NYK6 297 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 HESX1Q9UBX0 185 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 SAT1P21673 171 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 TRPC1P48995 793 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 MTTPP55157 894 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 OSTNP61366 133 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 ZBTB33Q86T24 672 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 LARP4BQ92615 738 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 RPS6KC1Q96S38 1066 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 KRT12Q99456 494 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 GPR108Q9NPR9 543 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 TRAF3IP3Q9Y228 551 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 RHOBTB1O94844 696 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 CCNHP51946 323 aaPredicted RBP11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 KLC3Q6P597 504 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 NSUN7Q8NE18 718 aaKnown RBP11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 NUDCD1Q96RS6 583 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 PCDHB4Q9Y5E5 795 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 PLA2G4AP47712 749 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 DALRD3Q5D0E6 543 aaKnown RBP11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 CWF19L1Q69YN2 538 aaKnown RBP11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 LONP2Q86WA8 852 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 SYNE4Q8N205 404 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 GABPB2Q8TAK5 448 aaPredicted RBP11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 TRIM63Q969Q1 353 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 ZSWIM5Q9P217 1185 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 FOSP01100 380 aaPredicted RBP11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 MYBPC2Q14324 1141 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 SYDE2Q5VT97 1194 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 TMC5Q6UXY8 1006 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 ZNF229Q9UJW7 825 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 TTC37Q6PGP7 1564 aa11.9□□□□□ -0.5
SMARCE1-202ENST00000348513 CD2BP2O95400 341 aaKnown RBP11.9□□□□□ -0.51
SMARCE1-202ENST00000348513 EXOC3L4Q17RC7 722 aa11.9□□□□□ -0.51
SMARCE1-202ENST00000348513 SPATA1Q5VX52 437 aa11.9□□□□□ -0.51
SMARCE1-202ENST00000348513 ZNF554Q86TJ5 538 aa11.9□□□□□ -0.51
SMARCE1-202ENST00000348513 PI4K2BQ8TCG2 481 aa11.9□□□□□ -0.51
SMARCE1-202ENST00000348513 AIFM3Q96NN9 605 aa11.9□□□□□ -0.51
SMARCE1-202ENST00000348513 KANSL2Q9H9L4 492 aa11.9□□□□□ -0.51
SMARCE1-202ENST00000348513 GOLGA8CPA6NN73 597 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 TLR3O15455 904 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 RASSF7Q02833 373 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 GRAPQ13588 217 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 HADHQ16836 314 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 KRT80Q6KB66 452 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 RASGRF2O14827 1237 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 N4BP1O75113 896 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 ANP32DO95626 131 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 ATP4AP20648 1035 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 NR2F2P24468 414 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 MARK3P27448 753 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 MTA1Q13330 715 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 TNIP2Q8NFZ5 429 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 PCDHA5Q9Y5H7 936 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 CCDC189A1A4V9 331 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 NVLO15381 856 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 PCP11498 1178 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 INPP1P49441 399 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 COPB1P53618 953 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 USP14P54578 494 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 LLGL1Q15334 1064 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 SUPT20HL1Q3ZLR7 823 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 CEP170P1Q96L14 293 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 VIPAS39Q9H9C1 493 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 KMT5AQ9NQR1 393 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 GMEB1Q9Y692 573 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 MBD5Q9P267 1494 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 MTERF2Q49AM1 385 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 THOC7Q6I9Y2 204 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 BRINP3Q76B58 766 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 CALML6Q8TD86 181 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 AP5M1Q9H0R1 490 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 PTPN22Q9Y2R2 807 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms